SMTL ID : 1c8n.1 (4 other biounits)

TOBACCO NECROSIS VIRUS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-trimer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: T.219, N.275 Chain C: D.160, D.163 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: A:T.219, C:D.163, H2O.2 CA.2: 4 residues within 4Å: Chain A: S.173, Q.174, T.175, A.178 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:S.173, A:T.175 CA.3: 5 residues within 4Å: Chain B: D.160, D.163 Chain C: S.218, T.219, N.275 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Metal complexes: B:D.160, B:D.163, C:T.219 CA.4: 5 residues within 4Å: Chain A: D.160, D.163 Chain B: S.218, T.219, N.275 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Metal complexes: A:D.160, A:D.163, B:T.219 CA.5: 3 residues within 4Å: Chain C: S.173, Q.174, T.175 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:S.173, C:T.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oda, Y. et al., Crystal structure of tobacco necrosis virus at 2.25 A resolution. J.Mol.Biol. (2000)

Release Date

2000-08-30

Peptides

COAT PROTEIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

COAT PROTEIN

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