SMTL ID : 1c9i.1

PEPTIDE-IN-GROOVE INTERACTIONS LINK TARGET PROTEINS TO THE B-PROPELLER OF CLATHRIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

2 x ALA- VAL- SER- LEU- LEU- ASP- LEU- ASP- ALA: B-ADAPTIN 3(Non-covalent)

ALA-VAL-SER-LEU-LEU-ASP-LEU-ASP-ALA.1: 13 residues within 4Å: Chain A: R.64, P.65, I.66, S.67, L.82, K.83, A.84, T.87, Q.89, F.91, K.96, S.97, K.98 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:R.64, A:I.66, A:L.82, A:L.82, A:A.84, A:Q.89, A:F.91, A:F.91, A:K.96, A:K.96 Hydrogen bonds: A:P.65, A:S.67, A:Q.89, A:Q.89, A:K.96 Salt bridges: A:K.96 ALA-VAL-SER-LEU-LEU-ASP-LEU-ASP-ALA.2: 13 residues within 4Å: Chain B: R.64, P.65, I.66, S.67, L.82, K.83, A.84, T.87, Q.89, F.91, I.93, K.96, K.98 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:R.64, B:P.65, B:I.66, B:A.84, B:F.91, B:F.91, B:K.96, B:K.96 Hydrogen bonds: B:R.64, B:P.65, B:S.67, B:Q.89, B:Q.89, B:K.96 Salt bridges: B:K.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

ter Haar, E. et al., Peptide-in-groove interactions link target proteins to the beta-propeller of clathrin. Proc.Natl.Acad.Sci.USA (2000)

Release Date

2000-02-07

Peptides

CLATHRIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CLATHRIN