SMTL ID : 1cfm.1

CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

3 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 25 residues within 4Å: Chain A: Y.1, P.2, F.4, A.5, Y.9, V.20, C.21, C.24, H.25, Q.59, A.62, L.69, N.70, V.71, G.72, M.73, V.74, N.153, G.155, R.156, G.157, V.159, Y.160, P.161 Chain C: N.16 24 PLIP interactions: 23 interactions with chain A, 1 interactions with chain C, Hydrophobic interactions: A:Y.1, A:Y.1, A:P.2, A:F.4, A:A.5, A:Y.9, A:N.70, A:V.74, A:R.156, A:Y.160, A:P.161 Hydrogen bonds: A:Y.1, A:Q.59, A:N.70, A:N.70, A:G.155, C:N.16 Water bridges: A:Y.1, A:A.62, A:R.156 Salt bridges: A:R.156 pi-Stacking: A:Y.1, A:F.4 Metal complexes: A:H.25 HEM.2: 25 residues within 4Å: Chain A: V.245 Chain B: Y.1, P.2, F.4, A.5, Y.9, V.20, C.21, C.24, H.25, Q.59, L.69, N.70, V.71, G.72, M.73, V.74, P.117, N.153, G.155, R.156, G.157, V.159, Y.160, P.161 21 PLIP interactions: 21 interactions with chain B, Hydrophobic interactions: B:Y.1, B:P.2, B:F.4, B:A.5, B:Y.9, B:N.70, B:V.74, B:P.117, B:R.156, B:P.161 Hydrogen bonds: B:Y.1, B:Y.1, B:Q.59, B:N.70, B:G.155 Water bridges: B:A.62, B:N.70, B:Y.160 Salt bridges: B:R.156 pi-Stacking: B:F.4 Metal complexes: B:H.25 HEM.3: 24 residues within 4Å: Chain C: Y.1, P.2, F.4, A.5, Y.9, V.20, C.21, C.24, H.25, Q.59, L.69, N.70, V.71, G.72, M.73, V.74, P.117, N.153, G.155, R.156, G.157, V.159, Y.160, P.161 26 PLIP interactions: 26 interactions with chain C, Hydrophobic interactions: C:Y.1, C:Y.1, C:P.2, C:F.4, C:F.4, C:A.5, C:Y.9, C:N.70, C:V.74, C:P.117, C:N.153, C:R.156, C:Y.160, C:P.161 Hydrogen bonds: C:Y.1, C:Y.1, C:Q.59, C:N.70, C:N.70, C:G.155, C:Y.160 Water bridges: C:A.62, C:R.156 Salt bridges: C:R.156 pi-Stacking: C:F.4 Metal complexes: C:H.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chi, Y.I. et al., X-ray structure of a truncated form of cytochrome f from chlamydomonas reinhardtii. Biochemistry (2000)

Release Date

1999-04-27

Peptides

CYTOCHROME F: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

CYTOCHROME F

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