SMTL ID : 1cgd.1

HYDRATION STRUCTURE OF A COLLAGEN PEPTIDE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-trimer

Ligands

7 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 3 residues within 4Å: Chain A: P.5 Chain B: P.7 Ligands: ACY.3 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:P.7 ACY.2: 3 residues within 4Å: Chain A: P.17 Chain B: P.19, P.20 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:P.19 Water bridges: B:P.20 Hydrogen bonds: A:P.17 ACY.3: 5 residues within 4Å: Chain A: G.3, P.4, P.5 Chain C: P.2 Ligands: ACY.1 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:P.4 Hydrogen bonds: C:P.2 ACY.4: 2 residues within 4Å: Chain A: P.16, P.17 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.16 Water bridges: A:P.17 ACY.5: 3 residues within 4Å: Chain A: P.2 Chain B: P.4, P.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.2 ACY.6: 2 residues within 4Å: Chain C: P.5, G.6 No protein-ligand interaction detected (PLIP) ACY.7: 1 residues within 4Å: Chain C: P.11 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bella, J. et al., Hydration structure of a collagen peptide. Structure (1995)

Release Date

1996-06-20

Peptides

COLLAGEN-LIKE PEPTIDE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

COLLAGEN-LIKE PEPTIDE

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