SMTL ID : 1ch4.1

MODULE-SUBSTITUTED CHIMERA HEMOGLOBIN BETA-ALPHA (F133V)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 16 residues within 4Å: Chain A: L.31, F.41, F.42, F.45, H.63, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 Ligands: CMO.2 21 PLIP interactions: 20 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:L.31, A:F.41, A:F.42, A:F.42, A:F.42, A:A.70, A:L.88, A:L.88, A:L.91, A:L.96, A:V.98, A:N.102, A:F.103, A:F.103, A:L.106, A:L.141 Salt bridges: A:H.63, A:H.63 pi-Stacking: A:H.92 Metal complexes: A:H.92, CMO.2 HEM.3: 16 residues within 4Å: Chain B: L.31, F.41, F.42, F.45, H.63, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 Ligands: CMO.4 21 PLIP interactions: 20 interactions with chain B, 1 Ligand-Ligand interactions Hydrophobic interactions: B:L.31, B:F.41, B:F.42, B:F.42, B:F.42, B:A.70, B:L.88, B:L.88, B:L.91, B:L.96, B:V.98, B:N.102, B:F.103, B:F.103, B:L.106, B:L.141 Salt bridges: B:H.63, B:H.63 pi-Stacking: B:H.92 Metal complexes: B:H.92, CMO.4 HEM.5: 16 residues within 4Å: Chain C: F.41, F.42, H.63, K.66, V.67, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 Ligands: CMO.6 18 PLIP interactions: 17 interactions with chain C, 1 Ligand-Ligand interactions Hydrophobic interactions: C:F.41, C:F.42, C:F.42, C:F.42, C:V.67, C:A.70, C:L.88, C:L.91, C:L.96, C:V.98, C:N.102, C:F.103, C:L.141 Salt bridges: C:H.63 pi-Stacking: C:H.63, C:H.63 Metal complexes: C:H.92, CMO.6 HEM.7: 16 residues within 4Å: Chain D: F.41, F.42, H.63, K.66, V.67, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 Ligands: CMO.8 18 PLIP interactions: 17 interactions with chain D, 1 Ligand-Ligand interactions Hydrophobic interactions: D:F.41, D:F.42, D:F.42, D:F.42, D:V.67, D:A.70, D:L.88, D:L.91, D:L.96, D:V.98, D:N.102, D:F.103, D:L.141 Salt bridges: D:H.63 pi-Stacking: D:H.63, D:H.63 Metal complexes: D:H.92, CMO.8

4 x CMO: CARBON MONOXIDE(Non-functional Binders)

CMO.2: 3 residues within 4Å: Chain A: H.63, V.67 Ligands: HEM.1 No protein-ligand interaction detected (PLIP) CMO.4: 3 residues within 4Å: Chain B: H.63, V.67 Ligands: HEM.3 No protein-ligand interaction detected (PLIP) CMO.6: 3 residues within 4Å: Chain C: H.63, V.67 Ligands: HEM.5 No protein-ligand interaction detected (PLIP) CMO.8: 3 residues within 4Å: Chain D: H.63, V.67 Ligands: HEM.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shirai, T. et al., Crystal structure of a protein with an artificial exon-shuffling, module M4-substituted chimera hemoglobin beta alpha, at 2.5 A resolution. J.Mol.Biol. (1999)

Release Date

1999-04-27

Peptides

MODULE-SUBSTITUTED CHIMERA HEMOGLOBIN BETA-ALPHA: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

MODULE-SUBSTITUTED CHIMERA HEMOGLOBIN BETA-ALPHA