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SMTL ID : 1civ.1
CHLOROPLAST NADP-DEPENDENT MALATE DEHYDROGENASE FROM FLAVERIA BIDENTIS
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.80 Å
Oligo State
homo-dimer
Ligands
2 x
NAP
:
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
(Non-covalent)
NAP.1:
25 residues within 4Å:
Chain A:
S.48
,
G.49
,
A.50
,
A.51
,
G.52
,
M.53
,
I.54
,
G.80
,
S.81
,
S.84
,
I.125
,
G.126
,
A.127
,
I.146
,
Q.150
,
V.167
,
G.168
,
N.169
,
L.193
,
L.196
,
H.225
,
T.280
,
M.380
,
E.384
,
M.385
23
PLIP interactions
:
23 interactions with chain A
Hydrophobic interactions:
A:I.54
,
A:T.280
,
A:E.384
Hydrogen bonds:
A:G.49
,
A:G.49
,
A:A.51
,
A:G.52
,
A:M.53
,
A:I.54
,
A:S.81
,
A:S.81
,
A:S.84
,
A:A.127
,
A:Q.150
,
A:V.167
,
A:N.169
,
A:N.169
,
A:E.384
,
A:M.385
Water bridges:
A:S.55
,
A:S.55
,
A:S.81
,
A:S.81
NAP.2:
25 residues within 4Å:
Chain B:
S.48
,
G.49
,
A.50
,
A.51
,
G.52
,
M.53
,
I.54
,
G.80
,
S.81
,
S.84
,
I.125
,
G.126
,
A.127
,
I.146
,
Q.150
,
V.167
,
G.168
,
N.169
,
L.193
,
L.196
,
H.225
,
T.280
,
M.380
,
E.384
,
M.385
23
PLIP interactions
:
23 interactions with chain B
Hydrophobic interactions:
B:I.54
,
B:T.280
,
B:E.384
Hydrogen bonds:
B:G.49
,
B:G.49
,
B:A.51
,
B:G.52
,
B:M.53
,
B:I.54
,
B:S.81
,
B:S.81
,
B:S.84
,
B:A.127
,
B:Q.150
,
B:V.167
,
B:N.169
,
B:N.169
,
B:M.385
,
B:M.385
Water bridges:
B:S.55
,
B:S.55
,
B:S.81
,
B:S.81
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Carr, P.D. et al., Chloroplast NADP-malate dehydrogenase: structural basis of light-dependent regulation of activity by thiol oxidation and reduction. Structure Fold.Des. (1999)
Release Date
2000-04-05
Peptides
NADP-MALATE DEHYDROGENASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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