SMTL ID : 1cm4.1

Motions of calmodulin-four-conformer refinement

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

17 x CA: CALCIUM ION(Non-covalent)

CA.1: 9 residues within 4Å: Chain A: D.20, D.22, G.23, D.24, T.26, E.31 Ligands: CA.2, CA.3, CA.4 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.20, A:D.20, A:D.22, A:D.24, A:T.26 CA.2: 10 residues within 4Å: Chain A: D.20, D.22, G.23, D.24, T.26, I.27, E.31 Ligands: CA.1, CA.3, CA.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.24, A:T.26, A:E.31, H2O.2 CA.3: 10 residues within 4Å: Chain A: D.20, D.22, G.23, D.24, T.26, I.27, E.31 Ligands: CA.1, CA.2, CA.4 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.24, A:T.26, A:E.31, A:E.31, H2O.2 CA.4: 9 residues within 4Å: Chain A: D.20, D.22, G.23, D.24, T.26, E.31 Ligands: CA.1, CA.2, CA.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.22, A:G.23, A:D.24, H2O.2 CA.5: 10 residues within 4Å: Chain A: D.56, A.57, D.58, G.59, N.60, T.62, E.67 Ligands: CA.7, CA.8, CA.9 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.56, A:A.57, A:T.62, A:E.67, A:E.67 CA.6: 2 residues within 4Å: Chain A: D.133, Q.135 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.133 CA.7: 9 residues within 4Å: Chain A: D.56, A.57, D.58, N.60, T.62, E.67 Ligands: CA.5, CA.8, CA.9 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:D.58, A:T.62, A:E.67, H2O.2 CA.8: 9 residues within 4Å: Chain A: D.56, A.57, D.58, N.60, T.62, E.67 Ligands: CA.5, CA.7, CA.9 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:D.58, A:T.62, A:E.67, H2O.2 CA.9: 9 residues within 4Å: Chain A: V.55, D.56, A.57, D.58, T.62, E.67 Ligands: CA.5, CA.7, CA.8 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.56, A:D.56, A:A.57, A:E.67, A:E.67 CA.10: 8 residues within 4Å: Chain A: D.93, D.95, N.97, Y.99, E.104 Ligands: CA.11, CA.12, CA.13 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.93, A:D.95, A:Y.99, A:E.104, H2O.1 CA.11: 8 residues within 4Å: Chain A: D.93, D.95, N.97, Y.99, E.104 Ligands: CA.10, CA.12, CA.13 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.99, A:E.104, A:E.104, H2O.1 CA.12: 9 residues within 4Å: Chain A: N.97, Y.99, I.100, S.101, E.104, Q.135 Ligands: CA.10, CA.11, CA.13 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Y.99, H2O.1, H2O.1 CA.13: 8 residues within 4Å: Chain A: D.93, D.95, N.97, Y.99, E.104 Ligands: CA.10, CA.11, CA.12 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.95, A:E.104, A:E.104, H2O.1 CA.14: 9 residues within 4Å: Chain A: D.129, D.131, D.133, Q.135, V.136, E.140 Ligands: CA.15, CA.16, CA.17 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.131, A:D.133, A:Q.135, A:E.140, H2O.2 CA.15: 8 residues within 4Å: Chain A: D.129, D.131, D.133, Q.135, E.140 Ligands: CA.14, CA.16, CA.17 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.129, A:D.131, A:D.133, A:Q.135, H2O.2 CA.16: 8 residues within 4Å: Chain A: D.129, D.131, D.133, Q.135, E.140 Ligands: CA.14, CA.15, CA.17 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.129, A:D.131, A:D.133, A:E.140, H2O.2 CA.17: 9 residues within 4Å: Chain A: D.129, D.131, D.133, Q.135, V.136, E.140 Ligands: CA.14, CA.15, CA.16 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.129, A:D.131, A:D.133, A:Q.135, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wall, M.E. et al., Motions of calmodulin characterized using both Bragg and diffuse X-ray scattering. Structure (1997)

Release Date

1998-03-04

Peptides

CALMODULIN: A
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CALMODULIN

CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA

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