SMTL ID : 1cmk.1

CRYSTAL STRUCTURES OF THE MYRISTYLATED CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE REVEAL OPEN AND CLOSED CONFORMATIONS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-6-6-mer

Ligands

6 x MYR: MYRISTIC ACID(Covalent)

MYR.1: 12 residues within 4Å: Chain A: G.1, S.10, E.11, S.14, V.15, F.18, F.100, L.152, E.155, Y.156, I.303, Y.306 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.15, A:F.18, A:F.18, A:F.100, A:F.100, A:L.152, A:E.155, A:Y.156, A:I.303, A:I.303, A:Y.306, A:Y.306 MYR.4: 12 residues within 4Å: Chain C: G.1, S.10, E.11, S.14, V.15, F.18, F.100, L.152, E.155, Y.156, I.303, Y.306 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:V.15, C:F.18, C:F.18, C:F.100, C:F.100, C:L.152, C:E.155, C:Y.156, C:I.303, C:I.303, C:Y.306, C:Y.306 MYR.7: 12 residues within 4Å: Chain E: G.1, S.10, E.11, S.14, V.15, F.18, F.100, L.152, E.155, Y.156, I.303, Y.306 12 PLIP interactions: 12 interactions with chain E Hydrophobic interactions: E:V.15, E:F.18, E:F.18, E:F.100, E:F.100, E:L.152, E:E.155, E:Y.156, E:I.303, E:I.303, E:Y.306, E:Y.306 MYR.10: 12 residues within 4Å: Chain G: G.1, S.10, E.11, S.14, V.15, F.18, F.100, L.152, E.155, Y.156, I.303, Y.306 12 PLIP interactions: 12 interactions with chain G Hydrophobic interactions: G:V.15, G:F.18, G:F.18, G:F.100, G:F.100, G:L.152, G:E.155, G:Y.156, G:I.303, G:I.303, G:Y.306, G:Y.306 MYR.13: 12 residues within 4Å: Chain I: G.1, S.10, E.11, S.14, V.15, F.18, F.100, L.152, E.155, Y.156, I.303, Y.306 12 PLIP interactions: 12 interactions with chain I Hydrophobic interactions: I:V.15, I:F.18, I:F.18, I:F.100, I:F.100, I:L.152, I:E.155, I:Y.156, I:I.303, I:I.303, I:Y.306, I:Y.306 MYR.16: 12 residues within 4Å: Chain K: G.1, S.10, E.11, S.14, V.15, F.18, F.100, L.152, E.155, Y.156, I.303, Y.306 12 PLIP interactions: 12 interactions with chain K Hydrophobic interactions: K:V.15, K:F.18, K:F.18, K:F.100, K:F.100, K:L.152, K:E.155, K:Y.156, K:I.303, K:I.303, K:Y.306, K:Y.306

12 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 2 residues within 4Å: Chain B: Y.3 Chain G: N.326 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: G.234 Chain B: Y.3 Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain D: Y.3 Chain K: N.326 Ligand excluded by PLIP IOD.6: 2 residues within 4Å: Chain C: G.234 Chain D: Y.3 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain F: Y.3 Chain I: N.326 Ligand excluded by PLIP IOD.9: 2 residues within 4Å: Chain E: G.234 Chain F: Y.3 Ligand excluded by PLIP IOD.11: 2 residues within 4Å: Chain A: N.326 Chain H: Y.3 Ligand excluded by PLIP IOD.12: 2 residues within 4Å: Chain G: G.234 Chain H: Y.3 Ligand excluded by PLIP IOD.14: 2 residues within 4Å: Chain E: N.326 Chain J: Y.3 Ligand excluded by PLIP IOD.15: 2 residues within 4Å: Chain I: G.234 Chain J: Y.3 Ligand excluded by PLIP IOD.17: 2 residues within 4Å: Chain C: N.326 Chain L: Y.3 Ligand excluded by PLIP IOD.18: 2 residues within 4Å: Chain K: G.234 Chain L: Y.3 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, J. et al., Crystal structures of the myristylated catalytic subunit of cAMP-dependent protein kinase reveal open and closed conformations. Protein Sci. (1993)

Release Date

1994-05-31

Peptides

cAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT: ACEGIK
cAMP-dependent protein kinase inhibitor, alpha form: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
E

E
E

G
E

I
E

K
E

B
I

D
I

F
I

H
I

J
I

L
I

cAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT

cAMP-dependent protein kinase inhibitor, alpha form

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