SMTL ID : 1cwu.1

BRASSICA NAPUS ENOYL ACP REDUCTASE A138G MUTANT COMPLEXED WITH NAD+ AND THIENODIAZABORINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 27 residues within 4Å: Chain A: G.14, I.15, A.16, G.20, Y.21, W.41, L.77, D.78, A.79, V.80, S.125, L.126, G.127, L.175, T.176, Y.177, K.195, A.222, G.223, P.224, L.225, S.227, R.228, A.229, A.230, I.236 Ligands: TDB.2 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:Y.177, A:A.222 Hydrogen bonds: A:G.14, A:Y.21, A:D.78, A:A.79, A:L.126, A:G.127, A:K.195, A:L.225, A:L.225, A:S.227, A:R.228, A:A.229 Water bridges: A:G.14, A:A.16, A:G.22 pi-Stacking: A:Y.21, A:W.41, A:W.41, A:W.41 NAD.3: 26 residues within 4Å: Chain B: G.14, I.15, A.16, G.20, Y.21, W.41, L.77, D.78, A.79, V.80, S.125, L.126, G.127, L.175, T.176, Y.177, K.195, A.222, G.223, P.224, L.225, S.227, R.228, A.229, A.230 Ligands: TDB.4 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:Y.21, B:Y.177 Hydrogen bonds: B:G.14, B:Y.21, B:G.22, B:W.41, B:D.78, B:A.79, B:V.80, B:L.126, B:G.127, B:K.195, B:L.225, B:L.225, B:S.227, B:A.229 Water bridges: B:L.126, B:L.126, B:S.151, B:R.228, B:R.228 pi-Stacking: B:W.41, B:W.41 NAD.5: 27 residues within 4Å: Chain C: G.14, I.15, A.16, G.20, Y.21, W.41, L.77, D.78, A.79, V.80, S.125, L.126, G.127, L.175, T.176, Y.177, K.195, A.222, G.223, P.224, L.225, S.227, R.228, A.229, A.230, I.236 Ligands: TDB.6 21 PLIP interactions: 21 interactions with chain C Hydrophobic interactions: C:Y.177, C:A.222 Hydrogen bonds: C:G.14, C:Y.21, C:D.78, C:A.79, C:L.126, C:G.127, C:K.195, C:L.225, C:L.225, C:S.227, C:R.228, C:A.229 Water bridges: C:G.14, C:A.16, C:G.22 pi-Stacking: C:Y.21, C:W.41, C:W.41, C:W.41 NAD.7: 26 residues within 4Å: Chain D: G.14, I.15, A.16, G.20, Y.21, W.41, L.77, D.78, A.79, V.80, S.125, L.126, G.127, L.175, T.176, Y.177, K.195, A.222, G.223, P.224, L.225, S.227, R.228, A.229, A.230 Ligands: TDB.8 23 PLIP interactions: 23 interactions with chain D Hydrophobic interactions: D:Y.21, D:Y.177 Hydrogen bonds: D:G.14, D:Y.21, D:G.22, D:W.41, D:D.78, D:A.79, D:V.80, D:L.126, D:G.127, D:K.195, D:L.225, D:L.225, D:S.227, D:A.229 Water bridges: D:L.126, D:L.126, D:S.151, D:R.228, D:R.228 pi-Stacking: D:W.41, D:W.41

4 x TDB: 6-METHYL-2(PROPANE-1-SULFONYL)-2H-THIENO[3,2-D][1,2,3]DIAZABORININ-1-OL(Non-covalent)

TDB.2: 12 residues within 4Å: Chain A: L.126, G.127, N.128, G.129, Y.177, Y.187, M.191, K.195, A.229, A.230, I.233 Ligands: NAD.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.177, A:Y.187 Hydrogen bonds: A:K.195 TDB.4: 13 residues within 4Å: Chain B: L.126, G.127, N.128, G.129, S.151, Y.177, Y.187, M.191, K.195, A.229, A.230, I.233 Ligands: NAD.3 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:Y.177, B:Y.187, B:I.233 Hydrogen bonds: B:Y.187, B:Y.187, B:K.195 TDB.6: 12 residues within 4Å: Chain C: L.126, G.127, N.128, G.129, Y.177, Y.187, M.191, K.195, A.229, A.230, I.233 Ligands: NAD.5 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:Y.177, C:Y.187 Hydrogen bonds: C:K.195 TDB.8: 13 residues within 4Å: Chain D: L.126, G.127, N.128, G.129, S.151, Y.177, Y.187, M.191, K.195, A.229, A.230, I.233 Ligands: NAD.7 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:Y.177, D:Y.187, D:I.233 Hydrogen bonds: D:Y.187, D:Y.187, D:K.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roujeinikova, A. et al., Inhibitor binding studies on enoyl reductase reveal conformational changes related to substrate recognition. J.Biol.Chem. (1999)

Release Date

1999-09-02

Peptides

ENOYL ACP REDUCTASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

ENOYL ACP REDUCTASE