SMTL ID : 1cxv.1 (1 other biounit)

STRUCTURE OF RECOMBINANT MOUSE COLLAGENASE-3 (MMP-13)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.119, H.123, H.129 Ligands: CBP.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.119, A:H.123, A:H.129 ZN.2: 4 residues within 4Å: Chain A: H.69, D.71, H.84, H.97 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.69, A:D.71, A:H.84, A:H.97

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: W.10, D.59, G.89, N.91, G.93 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.89, A:G.93, H2O.2 CA.4: 6 residues within 4Å: Chain A: D.76, G.77, S.79, L.81, D.99, E.102 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.76, A:G.77, A:S.79, A:L.81, A:D.99, A:E.102

1 x CBP: 2-{4-[4-(4-CHLORO-PHENOXY)-BENZENESULFONYL]-TETRAHYDRO-PYRAN-4-YL}-N-HYDROXY-ACETAMIDE(Non-covalent)

CBP.5: 18 residues within 4Å: Chain A: Y.73, G.80, L.81, L.82, A.83, I.115, V.116, H.119, E.120, H.123, H.129, L.136, F.138, P.139, I.140, Y.141, T.142 Ligands: ZN.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.81, A:I.115, A:V.116, A:Y.141, A:Y.141 Water bridges: A:E.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Botos, I. et al., Structure of recombinant mouse collagenase-3 (MMP-13). J.Mol.Biol. (1999)

Release Date

2000-08-30

Peptides

PROTEIN (COLLAGENASE-3): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (COLLAGENASE-3)

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