SMTL ID : 1cz8.1

VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH AN AFFINITY MATURED ANTIBODY

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-2-2-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain B: I.78 Chain D: Y.27, D.28, H.31, Y.32 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:D.28 Salt bridges: D:H.31 SO4.2: 5 residues within 4Å: Chain A: I.78 Chain F: Y.27, D.28, H.31, Y.32 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:D.28, F:Y.32 Salt bridges: F:H.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Y. et al., Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen. J.Mol.Biol. (1999)

Release Date

2000-03-20

Peptides

Vascular endothelial growth factor A: AB
LIGHT CHAIN OF NEUTRALIZING ANTIBODY: CE
HEAVY CHAIN OF NEUTRALIZING ANTIBODY: DF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
V

B
W

C
L

E
X

D
H

F
Y

Vascular endothelial growth factor A

LIGHT CHAIN OF NEUTRALIZING ANTIBODY

HEAVY CHAIN OF NEUTRALIZING ANTIBODY