SMTL ID : 1cz9.1

ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN (D64N) FROM CITRATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: V.42, V.43, T.44, T.60, M.146 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.43 Water bridges: A:A.143 SO4.3: 5 residues within 4Å: Chain B: V.42, V.43, T.44, T.60, M.146 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.43 Water bridges: B:A.143

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 4 residues within 4Å: Chain A: R.132, P.134, T.135, S.136 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.135, A:T.135, A:S.136 Water bridges: A:R.132 Salt bridges: A:R.132 CIT.4: 4 residues within 4Å: Chain B: R.132, P.134, T.135, S.136 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.135, B:S.136 Water bridges: B:R.132 Salt bridges: B:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lubkowski, J. et al., Atomic resolution structures of the core domain of avian sarcoma virus integrase and its D64N mutant. Biochemistry (1999)

Release Date

1999-09-08

Peptides

AVIAN SARCOMA VIRUS INTEGRASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

AVIAN SARCOMA VIRUS INTEGRASE