SMTL ID : 1d2m.1

UVRB PROTEIN OF THERMUS THERMOPHILUS HB8; A NUCLEOTIDE EXCISION REPAIR ENZYME

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 1 residues within 4Å: Chain A: A.438 No protein-ligand interaction detected (PLIP) BOG.2: 4 residues within 4Å: Chain A: W.263, R.267, E.270, E.271 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.271, A:E.271 BOG.3: 3 residues within 4Å: Chain A: I.559, E.560, N.563 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.559, A:E.560

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 5 residues within 4Å: Chain A: T.38, G.39, T.40, G.41, K.42 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.39, A:T.40, A:T.40, A:G.41, A:K.42 Water bridges: A:G.41, A:K.42, A:T.43 Salt bridges: A:K.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakagawa, N. et al., Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair. J.Biochem.(Tokyo) (1999)

Release Date

2000-03-22

Peptides

EXCINUCLEASE ABC SUBUNIT B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EXCINUCLEASE ABC SUBUNIT B