SMTL ID : 1d6q.1

HUMAN LYSOZYME E102 MUTANT LABELLED WITH 2',3'-EPOXYPROPYL GLYCOSIDE OF N-ACETYLLACTOSAMINE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x NAG- GAL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-GAL.1: 10 residues within 4Å: Chain A: Q.58, I.59, N.60, Y.63, W.64, E.102, Q.104, A.108, W.109 Ligands: GOL.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.104, A:N.60, A:Q.104, A:A.108 Hydrophobic interactions: A:W.109

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: D.53, Q.58, N.60 Ligands: NAG-GAL.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.53 Water bridges: A:N.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muraki, M. et al., Protein-carbohydrate interactions in human lysozyme probed by combining site-directed mutagenesis and affinity labeling. Biochemistry (2000)

Release Date

2000-01-21

Peptides

LYSOZYME: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LYSOZYME

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