SMTL ID : 1d8y.1

CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain B: H.578, E.582 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.578, B:E.582

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain B: R.359, H.411, R.431, K.435 4 PLIP interactions: 4 interactions with chain B Salt bridges: B:R.359, B:H.411, B:R.431, B:K.435 SO4.3: 5 residues within 4Å: Chain B: E.89, L.112, R.113, G.114, I.115 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.114, B:I.115 SO4.4: 2 residues within 4Å: Chain B: R.77, L.81 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.77 Salt bridges: B:K.17, B:R.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teplova, M. et al., Structural origins of the exonuclease resistance of a zwitterionic RNA. Proc.Natl.Acad.Sci.USA (1999)

Release Date

1999-12-02

Peptides

DNA POLYMERASE I: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

DNA POLYMERASE I