SMTL ID : 1d9k.5 (5 other biounits)

CRYSTAL STRUCTURE OF COMPLEX BETWEEN D10 TCR AND PMHC I-AK/CA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x NAG- NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NDG.1: 3 residues within 4Å: Chain C: N.119, E.167, W.169 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.167, C:W.169 NAG-NDG.2: 2 residues within 4Å: Chain D: N.18, Q.21 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:N.18, D:Q.21

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 1 residues within 4Å: Chain C: N.79 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reinherz, E.L. et al., The crystal structure of a T cell receptor in complex with peptide and MHC class II. Science (1999)

Release Date

1999-12-15

Peptides

T-CELL RECEPTOR D10 (ALPHA CHAIN): A
T-CELL RECEPTOR D10 (BETA CHAIN): B
MHC I-AK A CHAIN (ALPHA CHAIN): C
MHC I-AK B CHAIN (BETA CHAIN): D
CONALBUMIN PEPTIDE: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

E
Q

T-CELL RECEPTOR D10 (ALPHA CHAIN)

T-CELL RECEPTOR D10 (BETA CHAIN)

MHC I-AK A CHAIN (ALPHA CHAIN)

MHC I-AK B CHAIN (BETA CHAIN)

CONALBUMIN PEPTIDE

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