SMTL ID : 1daz.1

Structural and kinetic analysis of drug resistant mutants of HIV-1 protease

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

1 x 0Q4: N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide(Non-covalent)

0Q4.1: 29 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, I.45, M.46, I.47, G.48, G.49, I.50, F.53, Q.58, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, V.32, G.48, G.49, I.50, P.81, V.82, I.84 24 PLIP interactions: 10 interactions with chain B, 14 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:V.32, B:P.81, B:V.82, B:I.84, A:L.23, A:A.28, A:I.45, A:I.47, A:I.50, A:I.84 Hydrogen bonds: B:G.27, B:D.29, B:G.48, B:I.50, A:G.27, A:D.29, A:D.30, A:D.30, A:G.48, A:G.48 Water bridges: A:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mahalingam, B. et al., Structural and kinetic analysis of drug resistant mutants of HIV-1 protease. Eur.J.Biochem. (1999)

Release Date

2000-05-03

Peptides

HIV-1 PROTEASE (RETROPEPSIN): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

HIV-1 PROTEASE (RETROPEPSIN)

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