SMTL ID : 1db4.1

HUMAN S-PLA2 IN COMPLEX WITH INDOLE 8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: H.27, G.29, G.31, D.48 Ligands: 8IN.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.27, A:G.29, A:G.31, A:D.48, A:D.48 CA.2: 5 residues within 4Å: Chain A: F.23, Y.24, G.25, Y.112, N.114 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:F.23, A:G.25, A:Y.112

1 x 8IN: [3-(1-BENZYL-3-CARBAMOYLMETHYL-2-METHYL-1H-INDOL-5-YLOXY)-PROPYL-]-PHOSPHONIC ACID(Non-covalent)

8IN.3: 19 residues within 4Å: Chain A: L.2, F.5, H.6, A.17, A.18, Y.21, G.22, H.27, C.28, G.29, V.30, G.31, C.44, H.47, D.48, Y.51, K.52, K.62 Ligands: CA.1 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.2, A:F.5, A:F.5, A:H.6, A:A.17, A:Y.21, A:V.30 Hydrogen bonds: A:G.29, A:G.31, A:H.47, A:D.48, A:K.52, A:K.52 Water bridges: A:D.48, A:D.48 pi-Stacking: A:F.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schevitz, R.W. et al., Structure-based design of the first potent and selective inhibitor of human non-pancreatic secretory phospholipase A2. Nat.Struct.Biol. (1995)

Release Date

1999-11-12

Peptides

PHOSPHOLIPASE A2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHOLIPASE A2

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