SMTL ID : 1dgm.1

CRYSTAL STRUCTURE OF ADENOSINE KINASE FROM TOXOPLASMA GONDII

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: A.185, H.186, I.188, A.191 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:A.185, A:I.188, A:A.191, H2O.1, H2O.3

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: G.19, N.20, S.70, A.71, T.167 Ligands: ADN.3 Ligand excluded by PLIP

1 x ADN: ADENOSINE(Non-covalent)

ADN.3: 11 residues within 4Å: Chain A: N.20, I.22, D.24, G.69, S.70, N.73, C.127, L.138, Y.169, D.318 Ligands: CL.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.20, A:D.24, A:G.69, A:S.70, A:N.73, A:D.318 Water bridges: A:Y.169 pi-Stacking: A:Y.169

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 4 residues within 4Å: Chain A: G.315, A.316, G.317, D.318 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.315, A:A.316, A:G.317, A:D.318, A:D.318 Water bridges: A:D.318

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cook, W.J. et al., Crystal structure of adenosine kinase from Toxoplasma gondii at 1.8 A resolution. Protein Sci. (2000)

Release Date

2000-11-29

Peptides

ADENOSINE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADENOSINE KINASE