SMTL ID : 1dik.1

PYRUVATE PHOSPHATE DIKINASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.523, W.527 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.361 Salt bridges: A:R.523 SO4.2: 7 residues within 4Å: Chain A: K.22, M.99, P.100, G.101, M.102, M.103, R.337 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:M.99, A:G.101, A:M.102, A:M.103 Water bridges: A:M.99 Salt bridges: A:K.22, A:R.337 SO4.3: 3 residues within 4Å: Chain A: R.561, R.617, D.620 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.563 Water bridges: A:D.769, A:D.769 Salt bridges: A:R.561, A:R.617 SO4.4: 2 residues within 4Å: Chain B: R.523, W.527 2 PLIP interactions: 2 interactions with chain B Water bridges: B:R.523 Salt bridges: B:R.523 SO4.5: 7 residues within 4Å: Chain B: K.22, M.99, P.100, G.101, M.102, M.103, R.337 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:M.99, B:G.101, B:M.102, B:M.103 Water bridges: B:M.99 Salt bridges: B:K.22, B:R.337 SO4.6: 3 residues within 4Å: Chain B: R.561, R.617, D.620 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:E.563, B:D.620 Water bridges: B:E.563, B:D.769, B:D.769 Salt bridges: B:R.561, B:R.617

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Herzberg, O. et al., Swiveling-domain mechanism for enzymatic phosphotransfer between remote reaction sites. Proc.Natl.Acad.Sci.USA (1996)

Release Date

1996-04-03

Peptides

PYRUVATE PHOSPHATE DIKINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PYRUVATE PHOSPHATE DIKINASE