SMTL ID : 1dil.1

SIALIDASE FROM SALMONELLA TYPHIMURIUM COMPLEXED WITH APANA AND EPANA INHIBITORS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x EQP: (1R)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol(Non-covalent)

EQP.1: 14 residues within 4Å: Chain A: R.36, I.37, R.55, D.61, M.98, D.99, T.126, W.127, L.174, R.245, R.308, Y.341 Ligands: AXP.2, K.3 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.174 Hydrogen bonds: A:R.36, A:R.36, A:R.55, A:D.61, A:D.61, A:D.99, A:R.245, A:R.245, A:R.308, A:R.308, A:Y.341, A:Y.341 Water bridges: A:Q.62, A:D.99, A:T.126, A:W.127

1 x AXP: (1S)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol(Non-covalent)

AXP.2: 14 residues within 4Å: Chain A: R.36, I.37, R.55, D.61, M.98, D.99, T.126, W.127, L.174, R.245, R.308, Y.341 Ligands: EQP.1, K.3 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:W.127, A:L.174 Hydrogen bonds: A:R.36, A:R.36, A:R.55, A:D.61, A:D.99, A:R.245, A:R.245, A:R.308, A:R.308, A:Y.341, A:Y.341 Water bridges: A:Q.62, A:D.99, A:T.126, A:W.127, A:W.127

1 x K: POTASSIUM ION(Non-covalent)

K.3: 3 residues within 4Å: Chain A: D.61 Ligands: EQP.1, AXP.2 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.61, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crennell, S.J. et al., The structures of Salmonella typhimurium LT2 neuraminidase and its complexes with three inhibitors at high resolution. J.Mol.Biol. (1996)

Release Date

1996-12-07

Peptides

SIALIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SIALIDASE

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