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SMTL ID : 1dju.1
CRYSTAL STRUCTURE OF AROMATIC AMINOTRANSFERASE FROM PYROCOCCUS HORIKOSHII OT3
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.10 Å
Oligo State
homo-dimer
Ligands
2 x
PLP
:
PYRIDOXAL-5'-PHOSPHATE
(Covalent)
PLP.1:
13 residues within 4Å:
Chain A:
G.94
,
A.95
,
N.96
,
F.120
,
N.166
,
N.170
,
D.198
,
V.200
,
Y.201
,
S.231
,
K.232
,
R.240
Chain B:
Y.58
15
PLIP interactions
:
1 interactions with chain B
,
14 interactions with chain A
Hydrogen bonds:
B:Y.58
,
A:A.95
,
A:N.96
,
A:N.170
,
A:Y.201
,
A:S.231
,
A:S.231
Hydrophobic interactions:
A:F.120
,
A:N.170
,
A:V.200
,
A:Y.201
,
A:K.232
Salt bridges:
A:K.232
,
A:R.240
pi-Stacking:
A:F.120
PLP.2:
14 residues within 4Å:
Chain A:
Y.58
Chain B:
G.94
,
A.95
,
N.96
,
F.120
,
Y.123
,
N.166
,
N.170
,
D.198
,
V.200
,
Y.201
,
S.231
,
K.232
,
R.240
16
PLIP interactions
:
15 interactions with chain B
,
1 interactions with chain A
Hydrophobic interactions:
B:F.120
,
B:N.170
,
B:V.200
,
B:Y.201
,
B:K.232
Hydrogen bonds:
B:A.95
,
B:N.96
,
B:N.170
,
B:Y.201
,
B:S.231
,
B:S.231
Water bridges:
B:R.240
,
A:T.263
Salt bridges:
B:K.232
,
B:R.240
pi-Stacking:
B:F.120
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Matsui, I. et al., The molecular structure of hyperthermostable aromatic aminotransferase with novel substrate specificity from Pyrococcus horikoshii. J.Biol.Chem. (2000)
Release Date
2001-04-11
Peptides
AROMATIC AMINOTRANSFERASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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Secondary Structure
None
DSSP
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Fade Mismatches
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2° Structure
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AROMATIC AMINOTRANSFERASE
Cartoon
Cartoon
Tube
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Lines
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Hyperball
Rope
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