SMTL ID : 1dkf.1

CRYSTAL STRUCTURE OF A HETERODIMERIC COMPLEX OF RAR AND RXR LIGAND-BINDING DOMAINS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x OLA: OLEIC ACID(Non-covalent)

OLA.1: 15 residues within 4Å: Chain A: I.44, A.47, A.48, Q.51, N.82, L.85, I.86, A.89, R.92, L.102, A.103, V.118, I.121, C.208, F.215 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.44, A:A.47, A:L.85, A:I.86, A:L.102, A:V.118, A:V.118, A:I.121, A:F.215 Hydrogen bonds: A:A.103 Salt bridges: A:R.92

1 x BMS: 4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2']BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID(Non-covalent)

BMS.2: 22 residues within 4Å: Chain B: F.18, W.44, F.47, S.48, L.50, S.51, T.52, C.54, I.55, L.88, I.89, I.92, R.95, F.105, S.106, G.120, F.121, L.124, G.210, V.214, L.217, M.225 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:W.44, B:F.47, B:F.47, B:L.50, B:I.55, B:L.88, B:I.89, B:I.92, B:F.105, B:F.105, B:F.121, B:F.121, B:L.124, B:V.214, B:L.217 Hydrogen bonds: B:L.50, B:S.51, B:S.106 Salt bridges: B:R.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bourguet, W. et al., Crystal structure of a heterodimeric complex of RAR and RXR ligand-binding domains. Mol.Cell (2000)

Release Date

2000-04-19

Peptides

PROTEIN (RETINOID X RECEPTOR-ALPHA): A
PROTEIN (RETINOIC ACID RECEPTOR-ALPHA): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEIN (RETINOID X RECEPTOR-ALPHA)

PROTEIN (RETINOIC ACID RECEPTOR-ALPHA)

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