SMTL ID : 1dlm.1

STRUCTURE OF CATECHOL 1,2-DIOXYGENASE FROM ACINETOBACTER CALCOACETICUS NATIVE DATA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: Y.164, Y.200, R.221, H.224, H.226 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.164, A:Y.200, A:H.224, A:H.226, H2O.1 FE.3: 5 residues within 4Å: Chain B: Y.164, Y.200, R.221, H.224, H.226 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:Y.164, B:Y.200, B:H.224, B:H.226, H2O.4

2 x LIO: [1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE(Non-covalent)

LIO.2: 11 residues within 4Å: Chain A: I.50, E.54, Y.55, Y.61, L.62, L.211, Q.214 Chain B: I.33, A.71, S.75, F.80 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.50, A:E.54, A:Y.61, A:L.62, A:L.62, A:L.211, B:F.80 Water bridges: A:Y.61 LIO.4: 8 residues within 4Å: Chain A: N.27, I.33 Chain B: I.50, E.54, Y.55, Y.61, L.62, Q.214 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:I.50, B:E.54, B:Y.55, B:Y.61, B:Y.61, B:L.62 Hydrogen bonds: B:E.54, A:N.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., The 1.8 A crystal structure of catechol 1,2-dioxygenase reveals a novel hydrophobic helical zipper as a subunit linker. Structure Fold.Des. (2000)

Release Date

2000-05-23

Peptides

CATECHOL 1,2-DIOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CATECHOL 1,2-DIOXYGENASE

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