SMTL ID : 1dlu.1

UNLIGANDED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-tetramer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.257, A.259, E.260, R.263 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.257 Water bridges: A:S.106, A:S.257, A:A.259 Salt bridges: A:R.263 SO4.2: 2 residues within 4Å: Chain A: K.295, R.299 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.299, A:R.299 Salt bridges: A:R.299 SO4.3: 5 residues within 4Å: Chain A: A.34, R.38, I.196, V.197, P.198 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.38 SO4.5: 2 residues within 4Å: Chain B: K.295, R.299 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.299 Salt bridges: B:K.295, B:R.299 SO4.6: 4 residues within 4Å: Chain B: S.257, A.259, E.260, R.263 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.257, B:S.257 Water bridges: B:S.257, B:A.259, B:R.263 Salt bridges: B:R.263 SO4.7: 4 residues within 4Å: Chain B: R.38, I.196, V.197, P.198 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.38

4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.4: 10 residues within 4Å: Chain A: L.145, H.153, F.232, A.243, S.244, G.245, L.246, A.315, F.316, H.345 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.232, A:A.243, A:L.246, A:A.315, A:F.316 MPD.8: 9 residues within 4Å: Chain B: L.145, H.153, A.243, S.244, G.245, L.246, A.315, F.316, H.345 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.246, B:F.316 MPD.9: 10 residues within 4Å: Chain C: L.145, H.153, F.232, A.243, S.244, G.245, L.246, A.315, F.316, H.345 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:L.145, C:L.246, C:F.316, C:F.316 MPD.10: 10 residues within 4Å: Chain D: L.145, H.153, F.232, A.243, S.244, G.245, L.246, A.315, F.316, H.345 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:L.145, D:L.246, D:F.316, D:F.316

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Modis, Y. et al., Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase. J.Mol.Biol. (2000)

Release Date

2000-04-24

Peptides

BIOSYNTHETIC THIOLASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

BIOSYNTHETIC THIOLASE

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