SMTL ID : 1dmp.1

STRUCTURE OF HIV-1 PROTEASE COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x DMQ: [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-1,3-BIS([(3-AMINO)PHENYL]METHYL)-4,7-BIS(PHENYLMETHYL)-2H-1,3-DIAZEPINONE(Non-covalent)

DMQ.1: 27 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, I.84 25 PLIP interactions: 11 interactions with chain B, 14 interactions with chain A Hydrophobic interactions: B:A.28, B:V.32, B:I.50, B:P.81, B:I.84, A:A.28, A:D.30, A:V.32, A:I.47, A:I.50, A:P.81, A:V.82, A:I.84, A:I.84 Hydrogen bonds: B:G.27, B:D.29, B:D.30, B:D.30, B:D.30, B:I.50, A:D.25, A:G.27, A:D.29, A:D.30, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hodge, C.N. et al., Improved cyclic urea inhibitors of the HIV-1 protease: synthesis, potency, resistance profile, human pharmacokinetics and X-ray crystal structure of DMP 450. Chem.Biol. (1996)

Release Date

1997-11-12

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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