SMTL ID : 1dms.1

STRUCTURE OF DMSO REDUCTASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

2 x PGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)

PGD.1: 34 residues within 4Å: Chain A: Y.114, G.115, W.116, K.117, S.118, C.125, Y.146, S.147, R.326, G.432, G.433, N.434, H.438, Q.440, H.458, D.459, F.460, T.463, A.475, R.481, D.511, A.641, H.643, L.648, H.649, S.650, Q.651, E.715, V.736, N.737, G.754, Q.755 Ligands: PGD.2, 2MO.3 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:W.116, A:K.117, A:R.326, A:G.432, A:N.434, A:H.438, A:Q.440, A:H.458, A:R.481, A:R.481, A:L.648, A:S.650, A:Q.651, A:Q.651, A:N.737, A:N.737, A:Q.755 Water bridges: A:S.118, A:N.434, A:T.463, A:D.511, A:Q.651 Salt bridges: A:H.438, A:D.459, A:D.511, A:H.649, A:H.649 PGD.2: 34 residues within 4Å: Chain A: M.41, W.116, S.147, W.184, A.185, D.187, K.190, T.191, Q.193, I.194, I.220, D.221, P.222, V.223, T.225, P.240, Q.241, D.243, G.321, W.322, S.323, R.326, M.327, H.359, S.642, H.643, P.644, F.645, R.647, L.648, H.649, Q.755 Ligands: PGD.1, 2MO.3 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:A.185, A:K.190, A:T.191, A:I.220, A:Q.241, A:W.322, A:S.323, A:S.323, A:H.643, A:H.643, A:H.649, A:Q.755 Water bridges: A:T.191, A:T.191, A:D.243, A:S.642 Salt bridges: A:K.190, A:D.221, A:D.243, A:R.326, A:R.326, A:H.359, A:H.643, A:H.643

1 x 2MO: MOLYBDENUM (IV)OXIDE(Non-covalent)

2MO.3: 7 residues within 4Å: Chain A: Y.114, W.116, D.145, Y.146, S.147 Ligands: PGD.1, PGD.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.114, A:Y.146, A:S.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schneider, F. et al., Crystal structure of dimethyl sulfoxide reductase from Rhodobacter capsulatus at 1.88 A resolution. J.Mol.Biol. (1996)

Release Date

1998-07-01

Peptides

DMSO REDUCTASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DMSO REDUCTASE