SMTL ID : 1ds6.1

CRYSTAL STRUCTURE OF A RAC-RHOGDI COMPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.17, T.35 Ligands: GDP.2 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.17, A:T.35, H2O.1, H2O.1, H2O.2

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 17 residues within 4Å: Chain A: D.11, G.12, A.13, V.14, G.15, K.16, T.17, C.18, F.28, I.33, K.116, D.118, L.119, S.158, A.159, L.160 Ligands: MG.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:A.13, A:V.14, A:G.15, A:K.16, A:T.17, A:T.17, A:C.18, A:K.116, A:K.116, A:A.159, A:L.160 Water bridges: A:K.16, A:K.16, A:L.19 Salt bridges: A:K.16, A:D.118 pi-Stacking: A:F.28, A:F.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scheffzek, K. et al., The Rac-RhoGDI complex and the structural basis for the regulation of Rho proteins by RhoGDI. Nat.Struct.Biol. (2000)

Release Date

2000-07-12

Peptides

RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 2: A
RHO GDP-DISSOCIATION INHIBITOR 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 2

RHO GDP-DISSOCIATION INHIBITOR 2