SMTL ID : 1dth.1

METALLOPROTEASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.143, H.147, H.153 Ligands: BAT.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.143, A:H.147, A:H.153 ZN.4: 4 residues within 4Å: Chain B: H.143, H.147, H.153 Ligands: BAT.6 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.143, B:H.147, B:H.153

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: E.10, D.94, C.198, N.201 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.10, A:D.94, A:D.94, A:C.198 CA.5: 4 residues within 4Å: Chain B: E.10, D.94, C.198, N.201 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.10, B:D.94, B:D.94, B:C.198

2 x BAT: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE(Non-covalent)

BAT.3: 21 residues within 4Å: Chain A: E.106, E.107, T.108, L.109, G.110, L.111, V.139, T.140, H.143, E.144, H.147, H.153, C.165, I.166, R.168, P.169, G.170, L.171, T.172, Y.177 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:T.108, A:L.109, A:L.109, A:V.139, A:L.171, A:Y.177 Hydrogen bonds: A:G.110, A:P.169 BAT.6: 21 residues within 4Å: Chain B: E.107, T.108, L.109, G.110, L.111, V.139, T.140, H.143, E.144, H.147, H.153, L.164, C.165, I.166, R.168, P.169, G.170, L.171, T.172, Y.177 Ligands: ZN.4 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:T.108, B:L.109, B:L.109, B:V.139, B:L.171, B:L.171, B:Y.177 Hydrogen bonds: B:G.110, B:T.140, B:E.144, B:E.144, B:P.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Botos, I. et al., Batimastat, a potent matrix mealloproteinase inhibitor, exhibits an unexpected mode of binding. Proc.Natl.Acad.Sci.USA (1996)

Release Date

1997-02-12

Peptides

ATROLYSIN C: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ATROLYSIN C