SMTL ID : 1dug.1

STRUCTURE OF THE FIBRINOGEN G CHAIN INTEGRIN BINDING AND FACTOR XIIIA CROSSLINKING SITES OBTAINED THROUGH CARRIER PROTEIN DRIVEN CRYSTALLIZATION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 11 residues within 4Å: Chain A: Y.6, W.7, L.12, W.40, K.44, N.53, L.54, P.55, Q.66, S.67 Chain B: D.100 16 PLIP interactions: 15 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.12 Hydrogen bonds: A:N.53, A:N.53, A:L.54, A:L.54, A:Q.66, A:Q.66, A:S.67, A:Y.103, B:D.100 Water bridges: A:K.44, A:K.44, A:N.53, A:M.68, A:M.68 Salt bridges: A:K.44 GSH.2: 11 residues within 4Å: Chain A: D.100 Chain B: Y.6, W.7, L.12, W.40, K.44, N.53, L.54, P.55, Q.66, S.67 15 PLIP interactions: 13 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:L.12 Hydrogen bonds: B:N.53, B:L.54, B:L.54, B:L.54, B:Q.66, B:Q.66, B:S.67, A:D.100 Water bridges: B:K.44, B:K.44, B:M.68, B:Y.103, A:D.100 Salt bridges: B:K.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ware, S. et al., Structure of the fibrinogen gamma-chain integrin binding and factor XIIIa cross-linking sites obtained through carrier protein driven crystallization. Protein Sci. (1999)

Release Date

2000-02-02

Peptides

chimera of GLUTATHIONE S-TRANSFERASE-synthetic LINKEr-C-TERMINAL FIBRINOGEN GAMMA CHAIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

chimera of GLUTATHIONE S-TRANSFERASE-synthetic LINKEr-C-TERMINAL FIBRINOGEN GAMMA CHAIN