SMTL ID : 1dvj.1 (1 other biounit)

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE COMPLEXED WITH 6-AZAUMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x UP6: 6-AZA URIDINE 5'-MONOPHOSPHATE(Non-covalent)

UP6.1: 15 residues within 4Å: Chain A: A.17, D.19, K.41, D.69, K.71, M.125, S.126, P.179, V.181, V.200, G.201, R.202 Chain B: D.74, I.75, T.78 19 PLIP interactions: 17 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:D.19, A:K.41, A:K.71, A:S.126, A:S.126, A:S.126, A:V.181, A:G.201, A:R.202, B:D.74, B:T.78 Water bridges: A:D.19, A:G.180, A:G.180, A:G.180, A:Q.184, A:S.203, A:Y.205 Salt bridges: A:R.202 UP6.2: 16 residues within 4Å: Chain A: D.74, I.75, T.78 Chain B: A.17, D.19, K.41, D.69, K.71, M.125, S.126, P.179, V.181, Q.184, V.200, G.201, R.202 19 PLIP interactions: 17 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:D.19, B:K.41, B:K.71, B:S.126, B:S.126, B:S.126, B:V.181, B:Q.184, B:G.201, B:R.202, A:D.74, A:T.78 Water bridges: B:D.19, B:G.180, B:G.180, B:G.180, B:G.180, B:S.203 Salt bridges: B:R.202

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, N. et al., Electrostatic stress in catalysis: structure and mechanism of the enzyme orotidine monophosphate decarboxylase. Proc.Natl.Acad.Sci.USA (2000)

Release Date

2000-04-05

Peptides

OROTIDINE 5'-PHOSPHATE DECARBOXYLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

OROTIDINE 5'-PHOSPHATE DECARBOXYLASE

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