SMTL ID : 1dvp.1

CRYSTAL STRUCTURE OF THE VHS AND FYVE TANDEM DOMAINS OF HRS, A PROTEIN INVOLVED IN MEMBRANE TRAFFICKING AND SIGNAL TRANSDUCTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.164, C.167, C.188, C.191 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.164, A:C.167, A:C.188, A:C.191 ZN.2: 4 residues within 4Å: Chain A: C.180, C.183, C.210, C.213 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.180, A:C.183, A:C.210, A:C.213 ZN.4: 4 residues within 4Å: Chain B: C.164, C.167, C.188, C.191 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.164, B:C.167, B:C.188, B:C.191 ZN.5: 4 residues within 4Å: Chain B: C.180, C.183, C.210, C.213 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.180, B:C.183, B:C.210, B:C.213

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.3: 8 residues within 4Å: Chain A: R.176, H.178, H.179, R.181, R.208 Chain B: W.158, R.181, V.207 21 PLIP interactions: 6 interactions with chain B, 15 interactions with chain A Hydrophobic interactions: B:W.158 Hydrogen bonds: B:R.181, B:R.181, A:R.176, A:H.179, A:R.181, A:R.181 Water bridges: B:W.158, A:R.176, A:K.177, A:H.179, A:R.208, A:R.208 Salt bridges: B:R.181, B:K.205, A:H.178, A:H.179, A:R.181, A:R.181, A:R.181, A:R.208 CIT.6: 8 residues within 4Å: Chain A: W.158, R.181, V.207 Chain B: R.176, H.178, H.179, R.181, R.208 21 PLIP interactions: 15 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:R.176, B:H.179, B:R.181, B:R.181, A:R.181, A:R.181 Water bridges: B:R.176, B:K.177, B:H.179, B:R.208, B:R.208, A:W.158 Salt bridges: B:H.178, B:H.179, B:R.181, B:R.181, B:R.181, B:R.208, A:R.181, A:K.205 Hydrophobic interactions: A:W.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mao, Y. et al., Crystal structure of the VHS and FYVE tandem domains of Hrs, a protein involved in membrane trafficking and signal transduction. Cell(Cambridge,Mass.) (2000)

Release Date

2000-03-06

Peptides

HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE