SMTL ID : 1dxl.2 (1 other biounit)

Dihydrolipoamide dehydrogenase of glycine decarboxylase from Pisum Sativum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 37 residues within 4Å: Chain A: I.12, G.13, G.14, G.15, P.16, G.17, I.35, E.36, K.37, R.38, G.43, T.44, C.45, V.48, G.49, C.50, K.54, G.116, Y.117, G.118, A.146, T.147, G.148, S.149, S.167, I.188, R.277, F.280, D.317, M.323, L.324, A.325, H.326, A.328, Y.356 Chain B: H.449, P.450 25 PLIP interactions: 24 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.188, A:I.188 Hydrogen bonds: A:G.14, A:G.17, A:E.36, A:K.37, A:R.38, A:R.38, A:T.44, A:T.44, A:T.44, A:C.45, A:C.50, A:K.54, A:G.118, A:G.118, A:G.148, A:S.149, A:D.317, A:M.323, A:A.325, A:H.326, B:H.449 Water bridges: A:G.18 pi-Cation interactions: A:K.37 FAD.2: 37 residues within 4Å: Chain A: H.449, P.450 Chain B: I.12, G.13, G.14, G.15, P.16, G.17, I.35, E.36, K.37, R.38, G.43, T.44, C.45, G.49, C.50, K.54, G.116, Y.117, G.118, A.146, T.147, G.148, S.149, S.167, I.188, R.277, F.280, L.284, D.317, M.323, L.324, A.325, H.326, A.328, Y.356 25 PLIP interactions: 24 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:I.188, B:I.188 Hydrogen bonds: B:G.14, B:G.17, B:G.18, B:K.37, B:R.38, B:R.38, B:T.44, B:T.44, B:C.45, B:K.54, B:G.118, B:G.118, B:G.148, B:S.149, B:D.317, B:M.323, B:A.325, B:H.326, B:H.326, A:H.449 Water bridges: B:R.38, B:N.47 pi-Cation interactions: B:K.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Faure, M. et al., Interaction between the Lipoamide-Containing H-Protein and the Lipoamide Dehydrogenase (L-Protein) of the Glycine Decarboxylase Multienzyme System. 2. Crystal Structure of H- and L-Proteins. Eur.J.Biochem. (2000)

Release Date

2000-07-20

Peptides

DIHYDROLIPOAMIDE DEHYDROGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

DIHYDROLIPOAMIDE DEHYDROGENASE

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