SMTL ID : 1dzw.1

L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant F131A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.17 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: N.29, T.43, S.71, S.72, E.73 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.29, A:T.43, A:T.43, A:S.72 Water bridges: A:G.44 SO4.2: 2 residues within 4Å: Chain A: W.74, R.75 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.132 Water bridges: A:R.75 Salt bridges: A:R.75 SO4.5: 5 residues within 4Å: Chain B: N.29, T.43, S.71, S.72, E.73 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.29, B:T.43, B:T.43, B:S.72 Water bridges: B:G.44 SO4.6: 2 residues within 4Å: Chain B: W.74, R.75 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.132 Water bridges: B:R.75 Salt bridges: B:R.75 SO4.9: 5 residues within 4Å: Chain C: N.29, T.43, S.71, S.72, E.73 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.29, C:T.43, C:T.43, C:S.72 Water bridges: C:G.44 SO4.10: 2 residues within 4Å: Chain C: W.74, R.75 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:G.132 Water bridges: C:R.75 Salt bridges: C:R.75 SO4.13: 5 residues within 4Å: Chain D: N.29, T.43, S.71, S.72, E.73 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:N.29, D:T.43, D:T.43, D:S.72 Water bridges: D:G.44, D:E.73 SO4.14: 2 residues within 4Å: Chain D: W.74, R.75 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:G.132 Water bridges: D:R.75 Salt bridges: D:R.75

4 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 7 residues within 4Å: Chain A: C.14, M.17, N.23, G.28, V.30, T.41, I.45 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.45 BME.7: 7 residues within 4Å: Chain B: C.14, M.17, N.23, G.28, V.30, T.41, I.45 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:I.45 BME.11: 7 residues within 4Å: Chain C: C.14, M.17, N.23, G.28, V.30, T.41, I.45 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:I.45 BME.15: 7 residues within 4Å: Chain D: C.14, M.17, N.23, G.28, V.30, T.41, I.45 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:I.45

4 x ZN: ZINC ION(Non-covalent)

ZN.4: 5 residues within 4Å: Chain A: E.73, H.92, H.94, H.155 Chain B: Y.113 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.73, A:E.73, A:H.92, A:H.94, A:H.155 ZN.8: 5 residues within 4Å: Chain B: E.73, H.92, H.94, H.155 Chain D: Y.113 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.73, B:E.73, B:H.92, B:H.94, B:H.155 ZN.12: 5 residues within 4Å: Chain A: Y.113 Chain C: E.73, H.92, H.94, H.155 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.73, C:E.73, C:H.92, C:H.94, C:H.155 ZN.16: 5 residues within 4Å: Chain C: Y.113 Chain D: E.73, H.92, H.94, H.155 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.73, D:E.73, D:H.92, D:H.94, D:H.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joerger, A.C. et al., Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis. Biochemistry (2000)

Release Date

2000-06-02

Peptides

L-fuculose phosphate aldolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
P

C
P

D
P

L-fuculose phosphate aldolase