SMTL ID : 1e3l.1

P47H mutant of mouse class II alcohol dehydrogenase complex with NADH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 28 residues within 4Å: Chain A: H.47, T.48, F.93, C.178, S.182, G.203, L.204, G.205, C.206, V.207, D.227, I.228, N.229, K.232, C.272, A.273, T.275, Q.277, T.278, V.296, G.297, A.298, K.299, T.319, F.320, F.321, R.371 Ligands: ZN.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:H.47, A:G.203, A:L.204, A:C.206, A:V.207, A:I.228, A:K.232, A:A.273, A:T.275, A:Q.277, A:V.296, A:A.298, A:F.321 Water bridges: A:K.299 Salt bridges: A:R.371 NAD.4: 27 residues within 4Å: Chain B: H.47, T.48, F.93, C.178, S.182, G.203, L.204, G.205, C.206, V.207, I.226, D.227, I.228, N.229, K.232, C.272, A.273, T.275, T.278, V.296, G.297, K.299, T.319, F.320, F.321, M.364, R.371 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:H.47, B:T.48, B:G.203, B:L.204, B:L.204, B:G.205, B:C.206, B:V.207, B:I.228, B:A.273, B:T.275, B:V.296, B:A.298, B:F.321, B:R.371

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: C.46, T.48, H.67, C.178 Ligands: NAD.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.46, A:H.67, A:C.178, H2O.4 ZN.3: 6 residues within 4Å: Chain A: C.97, K.98, C.100, C.103, C.111, G.112 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.97, A:C.100, A:C.103, A:C.111 ZN.5: 3 residues within 4Å: Chain B: C.46, H.67, C.178 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.46, B:H.67, B:C.178, H2O.7 ZN.6: 6 residues within 4Å: Chain B: C.97, K.98, C.100, C.103, C.111, G.112 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.97, B:C.100, B:C.103, B:C.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Svensson, S. et al., Crystal Structure of Mouse Class II Alcohol Dehydrogenase Reveal Determinants of Substrate Specificity and Catalytic Efficiency. J.Mol.Biol. (2000)

Release Date

2000-09-12

Peptides

ALCOHOL DEHYDROGENASE, CLASS II: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ALCOHOL DEHYDROGENASE, CLASS II