- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.45 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x UVW: ACETYLPHOSPHATE(Non-covalent)
UVW.2: 7 residues within 4Å:- Chain A: G.67, G.68, I.69, V.70, A.71, N.177, S.178
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:A.71
- Hydrogen bonds: A:G.68, A:I.69, A:V.70, A:S.178, A:S.178
UVW.9: 7 residues within 4Å:- Chain B: G.67, G.68, I.69, V.70, A.71, N.177, S.178
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:A.71
- Hydrogen bonds: B:G.68, B:I.69, B:V.70, B:S.178, B:S.178
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain A: R.254, V.270, V.271, F.272
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.272, A:F.272
- Salt bridges: A:R.254
SO4.4: 3 residues within 4Å:- Chain A: H.11, R.12, T.35
3 PLIP interactions:3 interactions with chain A- Water bridges: A:T.35
- Salt bridges: A:H.11, A:R.12
SO4.5: 4 residues within 4Å:- Chain A: R.5, V.32, R.34, E.54
3 PLIP interactions:3 interactions with chain A- Water bridges: A:L.33
- Salt bridges: A:R.5, A:R.34
SO4.6: 4 residues within 4Å:- Chain A: R.34, F.50, S.53, E.54
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.53
- Salt bridges: A:R.34
SO4.10: 4 residues within 4Å:- Chain B: R.254, V.270, V.271, F.272
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:F.272, B:F.272
- Water bridges: B:R.254
- Salt bridges: B:R.254
SO4.11: 3 residues within 4Å:- Chain B: H.11, R.12, T.35
3 PLIP interactions:3 interactions with chain B- Water bridges: B:T.35
- Salt bridges: B:H.11, B:R.12
SO4.12: 4 residues within 4Å:- Chain B: R.5, V.32, R.34, E.54
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.30
- Water bridges: B:L.33
- Salt bridges: B:R.5, B:R.34
SO4.13: 4 residues within 4Å:- Chain B: R.34, F.50, S.53, E.54
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.53, B:E.54
- Salt bridges: B:R.34
- 2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.7: 4 residues within 4Å:- Chain A: R.20, R.21, H.170, W.311
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.20, A:R.20, A:R.21
- Water bridges: A:W.311, A:N.315
TRS.14: 4 residues within 4Å:- Chain B: R.20, R.21, H.170, W.311
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.20, B:R.20, B:R.21
- Water bridges: B:W.311, B:N.315
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rosano, C. et al., Probing the Catalytic Mechanism of Gdp-4-Keto-6-Deoxy-D-Mannose Epimerase/Reductase by Kinetic and Crystallographic Characterization of Site-Specific Mutants. J.Mol.Biol. (2000)
- Release Date
- 2000-10-22
- Peptides
- GDP-FUCOSE SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.45 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x UVW: ACETYLPHOSPHATE(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rosano, C. et al., Probing the Catalytic Mechanism of Gdp-4-Keto-6-Deoxy-D-Mannose Epimerase/Reductase by Kinetic and Crystallographic Characterization of Site-Specific Mutants. J.Mol.Biol. (2000)
- Release Date
- 2000-10-22
- Peptides
- GDP-FUCOSE SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A