- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 2 x F43: FACTOR 430(Non-covalent)
- 2 x TP7: Coenzyme B(Non-covalent)
TP7.2: 20 residues within 4Å:- Chain A: R.283, L.332, M.336, S.337, F.342, F.462, M.499, N.500, V.501
- Chain B: F.358, F.359, Y.364, G.365, G.366, H.376, V.377, V.378
- Chain D: R.238, K.269, H.270
20 PLIP interactions:9 interactions with chain B, 5 interactions with chain A, 6 interactions with chain D- Hydrophobic interactions: B:F.359, B:Y.364, B:V.377, B:V.378, A:M.336, A:F.342
- Hydrogen bonds: B:Y.364, B:G.366, D:K.269
- Water bridges: B:Y.364, B:G.366, A:R.283, A:M.336, D:R.238, D:R.238
- Salt bridges: B:H.376, A:R.283, D:R.238, D:K.269, D:K.269
TP7.7: 20 residues within 4Å:- Chain A: R.238, K.269, H.270
- Chain D: R.283, L.332, M.336, S.337, F.342, F.462, M.499, N.500, V.501
- Chain E: F.358, F.359, Y.364, G.365, G.366, H.376, V.377, V.378
20 PLIP interactions:5 interactions with chain D, 7 interactions with chain A, 8 interactions with chain E- Hydrophobic interactions: D:M.336, D:F.342, E:F.359, E:Y.364, E:V.377, E:V.378
- Water bridges: D:R.283, D:M.336, A:R.238, A:R.238, A:K.269, E:G.366
- Salt bridges: D:R.283, A:R.238, A:K.269, A:K.269, E:H.376
- Hydrogen bonds: A:K.269, E:Y.364, E:G.366
- 2 x COM: 1-THIOETHANESULFONIC ACID(Non-covalent)
COM.3: 9 residues within 4Å:- Chain A: Y.345, F.462, F.463
- Chain B: F.358, S.362, Y.364
- Chain C: L.117, R.120
- Ligands: F43.6
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain C- Hydrogen bonds: A:F.463
- Water bridges: C:R.120, C:R.120
- Salt bridges: C:R.120
COM.8: 9 residues within 4Å:- Chain D: Y.345, F.462, F.463
- Chain E: F.358, S.362, Y.364
- Chain F: L.117, R.120
- Ligands: F43.1
4 PLIP interactions:1 interactions with chain D, 3 interactions with chain F- Hydrogen bonds: D:F.463
- Water bridges: F:R.120, F:R.120
- Salt bridges: F:R.120
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 7 residues within 4Å:- Chain A: K.378, K.381, T.436, G.437, R.518
- Chain E: G.67, R.68
6 PLIP interactions:3 interactions with chain A, 3 interactions with chain E- Hydrogen bonds: A:R.518, E:G.67
- Water bridges: A:K.378, A:K.381, E:R.68, E:R.68
GOL.5: 8 residues within 4Å:- Chain A: K.269, H.270, L.273, V.274, S.275, E.278
- Chain E: K.61, M.167
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain E- Hydrogen bonds: A:K.269, A:S.275, A:S.275
- Water bridges: A:S.275, E:K.61
GOL.9: 7 residues within 4Å:- Chain B: G.67, R.68
- Chain D: K.378, K.381, T.436, G.437, R.518
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain D- Hydrogen bonds: B:G.67, B:R.68, D:R.518
- Water bridges: B:R.68, D:R.518
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Grabarse, W. et al., Comparison of Three Methyl-Coenzyme M Reductases from Phylogenetically Distant Organisms: Unusual Amino Acid Modification, Conservation and Adaptation. J.Mol.Biol. (2000)
- Release Date
- 2000-10-18
- Peptides
- METHYL-COENZYME M REDUCTASE SUBUNIT ALPHA: AD
METHYL-COENZYME M REDUCTASE I BETA SUBUNIT: BE
METHYL-COENZYME M REDUCTASE SUBUNIT GAMMA: CF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AD
DB
BE
EC
CF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 2 x F43: FACTOR 430(Non-covalent)
- 2 x TP7: Coenzyme B(Non-covalent)
- 2 x COM: 1-THIOETHANESULFONIC ACID(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Grabarse, W. et al., Comparison of Three Methyl-Coenzyme M Reductases from Phylogenetically Distant Organisms: Unusual Amino Acid Modification, Conservation and Adaptation. J.Mol.Biol. (2000)
- Release Date
- 2000-10-18
- Peptides
- METHYL-COENZYME M REDUCTASE SUBUNIT ALPHA: AD
METHYL-COENZYME M REDUCTASE I BETA SUBUNIT: BE
METHYL-COENZYME M REDUCTASE SUBUNIT GAMMA: CF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AD
DB
BE
EC
CF
F