- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x UVW: ACETYLPHOSPHATE(Non-covalent)
UVW.2: 7 residues within 4Å:- Chain A: G.67, G.68, I.69, V.70, A.71, N.177, S.178
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:A.71
- Hydrogen bonds: A:G.68, A:I.69, A:V.70, A:S.178, A:S.178
- Water bridges: A:A.71, A:A.71
UVW.9: 7 residues within 4Å:- Chain B: G.67, G.68, I.69, V.70, A.71, N.177, S.178
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:A.71
- Hydrogen bonds: B:G.68, B:I.69, B:V.70, B:S.178, B:S.178
- Water bridges: B:A.71, B:A.71
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain A: R.5, V.32, R.34, E.54
3 PLIP interactions:3 interactions with chain A- Water bridges: A:L.33
- Salt bridges: A:R.5, A:R.34
SO4.4: 4 residues within 4Å:- Chain A: H.11, R.12, R.20, T.35
5 PLIP interactions:5 interactions with chain A- Water bridges: A:H.11, A:R.20
- Salt bridges: A:H.11, A:R.12, A:R.20
SO4.5: 3 residues within 4Å:- Chain A: D.198, R.269, V.271
No protein-ligand interaction detected (PLIP)SO4.6: 3 residues within 4Å:- Chain A: R.152, P.238, M.239
3 PLIP interactions:3 interactions with chain A- Water bridges: A:R.152, A:R.152
- Salt bridges: A:R.152
SO4.10: 4 residues within 4Å:- Chain B: R.5, V.32, R.34, E.54
3 PLIP interactions:3 interactions with chain B- Water bridges: B:L.33
- Salt bridges: B:R.5, B:R.34
SO4.11: 4 residues within 4Å:- Chain B: H.11, R.12, R.20, T.35
5 PLIP interactions:5 interactions with chain B- Water bridges: B:H.11, B:R.20
- Salt bridges: B:H.11, B:R.12, B:R.20
SO4.12: 3 residues within 4Å:- Chain B: D.198, R.269, V.271
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.198
SO4.13: 3 residues within 4Å:- Chain B: R.152, P.238, M.239
3 PLIP interactions:3 interactions with chain B- Water bridges: B:R.152, B:R.152
- Salt bridges: B:R.152
- 2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.7: 4 residues within 4Å:- Chain A: S.17, R.21, H.170, W.311
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.21
- Water bridges: A:H.170
TRS.14: 4 residues within 4Å:- Chain B: S.17, R.21, H.170, W.311
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.21
- Water bridges: B:H.170
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rosano, C. et al., Probing the Catalytic Mechanism of Gdp-4-Keto-6-Deoxy-D-Mannose Epimerase/Reductase by Kinetic and Crystallographic Characterization of Site-Specific Mutants. J.Mol.Biol. (2000)
- Release Date
- 2000-10-18
- Peptides
- GDP-FUCOSE SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x UVW: ACETYLPHOSPHATE(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rosano, C. et al., Probing the Catalytic Mechanism of Gdp-4-Keto-6-Deoxy-D-Mannose Epimerase/Reductase by Kinetic and Crystallographic Characterization of Site-Specific Mutants. J.Mol.Biol. (2000)
- Release Date
- 2000-10-18
- Peptides
- GDP-FUCOSE SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A