SMTL ID : 1e8t.1

Structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: Y.356, N.358, T.360 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 3 residues within 4Å: Chain B: Y.356, N.358, T.360 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.356

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: E.133, D.138, S.141, V.143, V.173 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.138, A:V.143, A:V.173

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 7 residues within 4Å: Chain A: A.2, S.58, A.59, T.60, H.61, T.120, P.121 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.58, A:S.58, A:T.60 GOL.5: 6 residues within 4Å: Chain A: P.238, G.239, R.240, S.341, C.342, V.343 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.239, A:R.240, A:R.240, A:V.343 GOL.7: 2 residues within 4Å: Chain B: H.316, S.317 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.316, B:S.317

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.6: 2 residues within 4Å: Chain A: Y.217, N.218 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.217 Hydrogen bonds: A:Y.217, A:N.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crennell, S. et al., Crystal Structure of the Multifunctional Paramyxovirus Hemagglutinin-Neuraminidase. Nat.Struct.Biol. (2000)

Release Date

2001-04-03

Peptides

HEMAGGLUTININ-NEURAMINIDASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HEMAGGLUTININ-NEURAMINIDASE

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