SMTL ID : 1ed1.1

CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 100K.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 4 residues within 4Å: Chain A: P.23, H.96, E.98, Q.102 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.98, A:E.98 IPA.2: 6 residues within 4Å: Chain A: L.67, T.70, G.71 Chain B: F.44, G.45, L.46 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:T.70 Hydrophobic interactions: B:L.46 IPA.3: 4 residues within 4Å: Chain B: P.23, H.96, E.98, Q.102 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:E.98, B:E.98 IPA.4: 6 residues within 4Å: Chain B: L.67, T.70, G.71 Chain C: F.44, G.45, L.46 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:T.70 Hydrophobic interactions: C:L.46 IPA.5: 4 residues within 4Å: Chain C: P.23, H.96, E.98, Q.102 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:E.98, C:E.98 IPA.6: 6 residues within 4Å: Chain A: F.44, G.45, L.46 Chain C: L.67, T.70, G.71 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:T.70 Hydrophobic interactions: A:L.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rao, Z. et al., Crystal structure of SIV matrix antigen and implications for virus assembly. Nature (1995)

Release Date

2000-02-16

Peptides

GAG POLYPROTEIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

GAG POLYPROTEIN

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