SMTL ID : 1ehl.1

64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 5HT- DT: 5'-(D(5HT)P*(6-4)T)-3'(Non-covalent)

5HT-DT.1: 14 residues within 4Å: Chain A: H.31, N.33, Y.37, G.96, S.97, L.98 Chain B: W.33, H.35, T.50, S.59, R.99, S.100, G.101, Y.105 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:N.33, B:R.99, B:S.100 Hydrophobic interactions: B:Y.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yokoyama, H. et al., Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation. J.Mol.Biol. (2000)

Release Date

2001-02-21

Peptides

ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN): A
ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN)

ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN)