SMTL ID : 1enf.2 (2 other biounits)

CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN H DETERMINED TO 1.69 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

homo-hexamer

Ligands

78 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: S.35, G.36 Ligand excluded by PLIP SO4.2: 7 residues within 4Å: Chain A: Y.153, K.154, D.155 Chain C: K.120, E.121, K.148, Y.149 Ligand excluded by PLIP SO4.3: 7 residues within 4Å: Chain A: N.15, F.77, Y.78, Y.79, D.185 Chain C: V.108, R.126 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: G.182, E.183, N.184, Y.186, E.187 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain A: I.125, R.126, K.140 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: K.38, T.58, A.59 Ligand excluded by PLIP SO4.7: 7 residues within 4Å: Chain A: S.48 Chain C: R.126, T.127, N.128, K.129, E.136, K.140 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain A: K.150, S.156, E.157 Ligand excluded by PLIP SO4.9: 4 residues within 4Å: Chain A: K.68, N.69 Chain F: S.100 Ligands: SO4.74 Ligand excluded by PLIP SO4.10: 5 residues within 4Å: Chain A: K.150 Chain B: K.150 Chain C: K.150 Ligands: SO4.23, SO4.36 Ligand excluded by PLIP SO4.11: 6 residues within 4Å: Chain A: K.102, L.103, A.104, Q.105, K.130, D.201 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain A: I.34, Q.63, K.66 Ligand excluded by PLIP SO4.13: 3 residues within 4Å: Chain A: R.171, Y.173, K.196 Ligand excluded by PLIP SO4.14: 2 residues within 4Å: Chain B: S.35, G.36 Ligand excluded by PLIP SO4.15: 7 residues within 4Å: Chain A: K.120, E.121, K.148, Y.149 Chain B: Y.153, K.154, D.155 Ligand excluded by PLIP SO4.16: 7 residues within 4Å: Chain A: V.108, R.126 Chain B: N.15, F.77, Y.78, Y.79, D.185 Ligand excluded by PLIP SO4.17: 5 residues within 4Å: Chain B: G.182, E.183, N.184, Y.186, E.187 Ligand excluded by PLIP SO4.18: 3 residues within 4Å: Chain B: I.125, R.126, K.140 Ligand excluded by PLIP SO4.19: 3 residues within 4Å: Chain B: K.38, T.58, A.59 Ligand excluded by PLIP SO4.20: 7 residues within 4Å: Chain A: R.126, T.127, N.128, K.129, E.136, K.140 Chain B: S.48 Ligand excluded by PLIP SO4.21: 3 residues within 4Å: Chain B: K.150, S.156, E.157 Ligand excluded by PLIP SO4.22: 4 residues within 4Å: Chain B: K.68, N.69 Chain E: S.100 Ligands: SO4.61 Ligand excluded by PLIP SO4.23: 5 residues within 4Å: Chain A: K.150 Chain B: K.150 Chain C: K.150 Ligands: SO4.10, SO4.36 Ligand excluded by PLIP SO4.24: 6 residues within 4Å: Chain B: K.102, L.103, A.104, Q.105, K.130, D.201 Ligand excluded by PLIP SO4.25: 3 residues within 4Å: Chain B: I.34, Q.63, K.66 Ligand excluded by PLIP SO4.26: 3 residues within 4Å: Chain B: R.171, Y.173, K.196 Ligand excluded by PLIP SO4.27: 2 residues within 4Å: Chain C: S.35, G.36 Ligand excluded by PLIP SO4.28: 7 residues within 4Å: Chain B: K.120, E.121, K.148, Y.149 Chain C: Y.153, K.154, D.155 Ligand excluded by PLIP SO4.29: 7 residues within 4Å: Chain B: V.108, R.126 Chain C: N.15, F.77, Y.78, Y.79, D.185 Ligand excluded by PLIP SO4.30: 5 residues within 4Å: Chain C: G.182, E.183, N.184, Y.186, E.187 Ligand excluded by PLIP SO4.31: 3 residues within 4Å: Chain C: I.125, R.126, K.140 Ligand excluded by PLIP SO4.32: 3 residues within 4Å: Chain C: K.38, T.58, A.59 Ligand excluded by PLIP SO4.33: 7 residues within 4Å: Chain B: R.126, T.127, N.128, K.129, E.136, K.140 Chain C: S.48 Ligand excluded by PLIP SO4.34: 3 residues within 4Å: Chain C: K.150, S.156, E.157 Ligand excluded by PLIP SO4.35: 4 residues within 4Å: Chain C: K.68, N.69 Chain D: S.100 Ligands: SO4.48 Ligand excluded by PLIP SO4.36: 5 residues within 4Å: Chain A: K.150 Chain B: K.150 Chain C: K.150 Ligands: SO4.10, SO4.23 Ligand excluded by PLIP SO4.37: 6 residues within 4Å: Chain C: K.102, L.103, A.104, Q.105, K.130, D.201 Ligand excluded by PLIP SO4.38: 3 residues within 4Å: Chain C: I.34, Q.63, K.66 Ligand excluded by PLIP SO4.39: 3 residues within 4Å: Chain C: R.171, Y.173, K.196 Ligand excluded by PLIP SO4.40: 2 residues within 4Å: Chain D: S.35, G.36 Ligand excluded by PLIP SO4.41: 7 residues within 4Å: Chain D: Y.153, K.154, D.155 Chain F: K.120, E.121, K.148, Y.149 Ligand excluded by PLIP SO4.42: 7 residues within 4Å: Chain D: N.15, F.77, Y.78, Y.79, D.185 Chain F: V.108, R.126 Ligand excluded by PLIP SO4.43: 5 residues within 4Å: Chain D: G.182, E.183, N.184, Y.186, E.187 Ligand excluded by PLIP SO4.44: 3 residues within 4Å: Chain D: I.125, R.126, K.140 Ligand excluded by PLIP SO4.45: 3 residues within 4Å: Chain D: K.38, T.58, A.59 Ligand excluded by PLIP SO4.46: 7 residues within 4Å: Chain D: S.48 Chain F: R.126, T.127, N.128, K.129, E.136, K.140 Ligand excluded by PLIP SO4.47: 3 residues within 4Å: Chain D: K.150, S.156, E.157 Ligand excluded by PLIP SO4.48: 4 residues within 4Å: Chain C: S.100 Chain D: K.68, N.69 Ligands: SO4.35 Ligand excluded by PLIP SO4.49: 5 residues within 4Å: Chain D: K.150 Chain E: K.150 Chain F: K.150 Ligands: SO4.62, SO4.75 Ligand excluded by PLIP SO4.50: 6 residues within 4Å: Chain D: K.102, L.103, A.104, Q.105, K.130, D.201 Ligand excluded by PLIP SO4.51: 3 residues within 4Å: Chain D: I.34, Q.63, K.66 Ligand excluded by PLIP SO4.52: 3 residues within 4Å: Chain D: R.171, Y.173, K.196 Ligand excluded by PLIP SO4.53: 2 residues within 4Å: Chain E: S.35, G.36 Ligand excluded by PLIP SO4.54: 7 residues within 4Å: Chain D: K.120, E.121, K.148, Y.149 Chain E: Y.153, K.154, D.155 Ligand excluded by PLIP SO4.55: 7 residues within 4Å: Chain D: V.108, R.126 Chain E: N.15, F.77, Y.78, Y.79, D.185 Ligand excluded by PLIP SO4.56: 5 residues within 4Å: Chain E: G.182, E.183, N.184, Y.186, E.187 Ligand excluded by PLIP SO4.57: 3 residues within 4Å: Chain E: I.125, R.126, K.140 Ligand excluded by PLIP SO4.58: 3 residues within 4Å: Chain E: K.38, T.58, A.59 Ligand excluded by PLIP SO4.59: 7 residues within 4Å: Chain D: R.126, T.127, N.128, K.129, E.136, K.140 Chain E: S.48 Ligand excluded by PLIP SO4.60: 3 residues within 4Å: Chain E: K.150, S.156, E.157 Ligand excluded by PLIP SO4.61: 4 residues within 4Å: Chain B: S.100 Chain E: K.68, N.69 Ligands: SO4.22 Ligand excluded by PLIP SO4.62: 5 residues within 4Å: Chain D: K.150 Chain E: K.150 Chain F: K.150 Ligands: SO4.49, SO4.75 Ligand excluded by PLIP SO4.63: 6 residues within 4Å: Chain E: K.102, L.103, A.104, Q.105, K.130, D.201 Ligand excluded by PLIP SO4.64: 3 residues within 4Å: Chain E: I.34, Q.63, K.66 Ligand excluded by PLIP SO4.65: 3 residues within 4Å: Chain E: R.171, Y.173, K.196 Ligand excluded by PLIP SO4.66: 2 residues within 4Å: Chain F: S.35, G.36 Ligand excluded by PLIP SO4.67: 7 residues within 4Å: Chain E: K.120, E.121, K.148, Y.149 Chain F: Y.153, K.154, D.155 Ligand excluded by PLIP SO4.68: 7 residues within 4Å: Chain E: V.108, R.126 Chain F: N.15, F.77, Y.78, Y.79, D.185 Ligand excluded by PLIP SO4.69: 5 residues within 4Å: Chain F: G.182, E.183, N.184, Y.186, E.187 Ligand excluded by PLIP SO4.70: 3 residues within 4Å: Chain F: I.125, R.126, K.140 Ligand excluded by PLIP SO4.71: 3 residues within 4Å: Chain F: K.38, T.58, A.59 Ligand excluded by PLIP SO4.72: 7 residues within 4Å: Chain E: R.126, T.127, N.128, K.129, E.136, K.140 Chain F: S.48 Ligand excluded by PLIP SO4.73: 3 residues within 4Å: Chain F: K.150, S.156, E.157 Ligand excluded by PLIP SO4.74: 4 residues within 4Å: Chain A: S.100 Chain F: K.68, N.69 Ligands: SO4.9 Ligand excluded by PLIP SO4.75: 5 residues within 4Å: Chain D: K.150 Chain E: K.150 Chain F: K.150 Ligands: SO4.49, SO4.62 Ligand excluded by PLIP SO4.76: 6 residues within 4Å: Chain F: K.102, L.103, A.104, Q.105, K.130, D.201 Ligand excluded by PLIP SO4.77: 3 residues within 4Å: Chain F: I.34, Q.63, K.66 Ligand excluded by PLIP SO4.78: 3 residues within 4Å: Chain F: R.171, Y.173, K.196 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hakansson, M. et al., The crystal structure of staphylococcal enterotoxin H: implications for binding properties to MHC class II and TcR molecules. J.Mol.Biol. (2000)

Release Date

2000-04-19

Peptides

ENTEROTOXIN H: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

ENTEROTOXIN H

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