SMTL ID : 1eon.1

ECORV BOUND TO 3'-S-PHOSPHOROTHIOLATE DNA AND CA2+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain C: E.45, D.74 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain C: D.74, I.91 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain D: E.45, D.74, I.91 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain D: E.45, D.74 Ligand excluded by PLIP

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.3: 9 residues within 4Å: Chain C: N.15, Y.18, D.19, V.20, F.44, F.47, Y.136, Y.163, V.166 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:N.15, C:F.47, C:Y.136 Hydrogen bonds: C:V.20 ACY.6: 8 residues within 4Å: Chain D: N.15, Y.18, D.19, V.20, F.44, F.47, Y.163, V.166 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:F.44, D:F.47 Hydrogen bonds: D:V.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horton, N.C. et al., Inhibition of EcoRV Endonuclease by Deoxyribo-3'-S-phosphorothiolates: A High-Resolution X-ray Crystallographic Study. J.Am.Chem.Soc. (2000)

Release Date

2000-04-04

Peptides

TYPE II RESTRICTION ENZYME ECORV: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

TYPE II RESTRICTION ENZYME ECORV

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