- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x ORO: OROTIC ACID(Non-covalent)
ORO.2: 13 residues within 4Å:- Chain A: K.48, N.72, A.73, I.74, G.75, L.76, N.132, C.135, P.136, N.137, N.197, T.198
- Ligands: FMN.1
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:L.76
- Hydrogen bonds: A:N.72, A:N.72, A:I.74, A:G.75, A:L.76, A:N.132, A:N.137, A:N.197, A:N.197
- Salt bridges: A:K.48
ORO.6: 13 residues within 4Å:- Chain C: K.48, N.72, A.73, I.74, G.75, L.76, N.132, C.135, P.136, N.137, N.197, T.198
- Ligands: FMN.5
13 PLIP interactions:13 interactions with chain C- Hydrophobic interactions: C:L.76
- Hydrogen bonds: C:N.72, C:N.72, C:N.72, C:I.74, C:G.75, C:L.76, C:N.132, C:N.137, C:N.197, C:N.197, C:T.198
- Salt bridges: C:K.48
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.3: 18 residues within 4Å:- Chain A: E.65
- Chain B: L.50, R.52, P.53, I.54, S.55, L.69, Y.70, R.71, T.77, G.78, T.79, I.119, E.220, S.221, R.222, M.223, P.252
19 PLIP interactions:18 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:P.53, B:E.220, B:P.252
- Hydrogen bonds: B:R.52, B:P.53, B:S.55, B:L.69, B:R.71, B:T.77, B:G.78, B:T.79, B:T.79
- Water bridges: B:R.222, B:M.223, B:M.223, A:E.65
- Salt bridges: B:R.52, B:R.52
- pi-Cation interactions: B:R.222
FAD.7: 18 residues within 4Å:- Chain C: E.65
- Chain D: L.50, R.52, P.53, I.54, S.55, L.69, Y.70, R.71, T.77, G.78, T.79, I.119, E.220, S.221, R.222, M.223, P.252
18 PLIP interactions:17 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:P.53, D:E.220, D:P.252
- Hydrogen bonds: D:R.52, D:P.53, D:S.55, D:L.69, D:R.71, D:G.78, D:T.79, D:T.79
- Water bridges: D:R.222, D:M.223, D:M.223, C:E.65
- Salt bridges: D:R.52, D:R.52
- pi-Cation interactions: D:R.222
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.4: 12 residues within 4Å:- Chain B: M.223, A.224, C.225, G.226, G.228, A.229, C.230, Y.231, A.232, C.233, K.246, C.248
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.225, B:C.230, B:C.233, B:C.248
FES.8: 12 residues within 4Å:- Chain D: M.223, A.224, C.225, G.226, G.228, A.229, C.230, Y.231, A.232, C.233, K.246, C.248
4 PLIP interactions:4 interactions with chain D,- Metal complexes: D:C.225, D:C.230, D:C.233, D:C.248
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rowland, P. et al., Structure of dihydroorotate dehydrogenase B: electron transfer between two flavin groups bridged by an iron-sulphur cluster. Structure Fold.Des. (2000)
- Release Date
- 2001-01-17
- Peptides
- DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT): AC
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT): BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x ORO: OROTIC ACID(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rowland, P. et al., Structure of dihydroorotate dehydrogenase B: electron transfer between two flavin groups bridged by an iron-sulphur cluster. Structure Fold.Des. (2000)
- Release Date
- 2001-01-17
- Peptides
- DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT): AC
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT): BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B