SMTL ID : 1ex4.4 (9 other biounits)

HIV-1 INTEGRASE CATALYTIC CORE AND C-TERMINAL DOMAIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-12-mer

Ligands

24 x CPS: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE(Non-covalent)

CPS.1: 4 residues within 4Å: Chain A: W.186, K.217, I.219, R.220 Ligand excluded by PLIP CPS.2: 5 residues within 4Å: Chain A: Q.167, I.168, L.193, W.194, V.201 Ligand excluded by PLIP CPS.3: 2 residues within 4Å: Chain B: Y.177, W.186 Ligand excluded by PLIP CPS.4: 10 residues within 4Å: Chain B: I.168, I.171, F.174, L.192, L.193, W.194, K.195, I.218 Chain C: K.217, R.220 Ligand excluded by PLIP CPS.5: 4 residues within 4Å: Chain C: W.186, K.217, I.219, R.220 Ligand excluded by PLIP CPS.6: 5 residues within 4Å: Chain C: Q.167, I.168, L.193, W.194, V.201 Ligand excluded by PLIP CPS.7: 2 residues within 4Å: Chain D: Y.177, W.186 Ligand excluded by PLIP CPS.8: 10 residues within 4Å: Chain D: I.168, I.171, F.174, L.192, L.193, W.194, K.195, I.218 Chain E: K.217, R.220 Ligand excluded by PLIP CPS.9: 4 residues within 4Å: Chain E: W.186, K.217, I.219, R.220 Ligand excluded by PLIP CPS.10: 5 residues within 4Å: Chain E: Q.167, I.168, L.193, W.194, V.201 Ligand excluded by PLIP CPS.11: 2 residues within 4Å: Chain F: Y.177, W.186 Ligand excluded by PLIP CPS.12: 10 residues within 4Å: Chain A: K.217, R.220 Chain F: I.168, I.171, F.174, L.192, L.193, W.194, K.195, I.218 Ligand excluded by PLIP CPS.13: 4 residues within 4Å: Chain G: W.186, K.217, I.219, R.220 Ligand excluded by PLIP CPS.14: 5 residues within 4Å: Chain G: Q.167, I.168, L.193, W.194, V.201 Ligand excluded by PLIP CPS.15: 2 residues within 4Å: Chain H: Y.177, W.186 Ligand excluded by PLIP CPS.16: 10 residues within 4Å: Chain H: I.168, I.171, F.174, L.192, L.193, W.194, K.195, I.218 Chain I: K.217, R.220 Ligand excluded by PLIP CPS.17: 4 residues within 4Å: Chain I: W.186, K.217, I.219, R.220 Ligand excluded by PLIP CPS.18: 5 residues within 4Å: Chain I: Q.167, I.168, L.193, W.194, V.201 Ligand excluded by PLIP CPS.19: 2 residues within 4Å: Chain J: Y.177, W.186 Ligand excluded by PLIP CPS.20: 10 residues within 4Å: Chain J: I.168, I.171, F.174, L.192, L.193, W.194, K.195, I.218 Chain K: K.217, R.220 Ligand excluded by PLIP CPS.21: 4 residues within 4Å: Chain K: W.186, K.217, I.219, R.220 Ligand excluded by PLIP CPS.22: 5 residues within 4Å: Chain K: Q.167, I.168, L.193, W.194, V.201 Ligand excluded by PLIP CPS.23: 2 residues within 4Å: Chain L: Y.177, W.186 Ligand excluded by PLIP CPS.24: 10 residues within 4Å: Chain G: K.217, R.220 Chain L: I.168, I.171, F.174, L.192, L.193, W.194, K.195, I.218 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, J.C. et al., Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding. Proc.Natl.Acad.Sci.USA (2000)

Release Date

2000-06-07

Peptides

INTEGRASE: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

G
A

H
B

I
A

J
B

K
A

L
B

INTEGRASE

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