SMTL ID : 1ex7.1

CRYSTAL STRUCTURE OF YEAST GUANYLATE KINASE IN COMPLEX WITH GUANOSINE-5'-MONOPHOSPHATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.60, K.63, N.64 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.64 Water bridges: A:K.63, A:K.63, A:K.63, A:N.64 Salt bridges: A:K.63 SO4.2: 7 residues within 4Å: Chain A: S.10, G.11, T.12, G.13, K.14, S.15, R.135 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.11, A:G.13, A:S.15, A:S.15 Salt bridges: A:R.135

1 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

5GP.3: 13 residues within 4Å: Chain A: S.34, R.38, R.41, Y.50, E.69, F.73, Y.78, G.79, S.80, D.98, I.99, D.100, G.103 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:S.34, A:Y.50, A:Y.78, A:D.100, A:G.103 Water bridges: A:G.8, A:G.8, A:S.10, A:S.10, A:S.10, A:S.10, A:K.14, A:K.14, A:K.14, A:R.38, A:R.38, A:W.70, A:W.70, A:D.98, A:D.100, A:D.100 Salt bridges: A:R.38, A:R.41, A:E.69, A:D.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blaszczyk, J. et al., Crystal structure of unligated guanylate kinase from yeast reveals GMP-induced conformational changes. J.Mol.Biol. (2001)

Release Date

2001-03-16

Peptides

GUANYLATE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GUANYLATE KINASE

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