SMTL ID : 1ezj.1

CRYSTAL STRUCTURE OF THE MULTIMERIZATION DOMAIN OF THE PHOSPHOPROTEIN FROM SENDAI VIRUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

4 x EMC: ETHYL MERCURY ION(Non-covalent)

EMC.1: 5 residues within 4Å: Chain A: T.50, V.53, C.54 Chain C: M.49, V.53 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:T.50, C:V.53 Metal complexes: A:T.50 EMC.3: 5 residues within 4Å: Chain B: T.50, V.53, C.54 Chain D: M.49, V.53 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: B:T.50, D:V.53 Metal complexes: B:T.50 EMC.5: 5 residues within 4Å: Chain B: M.49, V.53 Chain C: T.50, V.53, C.54 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:V.53, C:T.50 Metal complexes: C:T.50 EMC.7: 5 residues within 4Å: Chain A: M.49, V.53 Chain D: T.50, V.53, C.54 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain D Hydrophobic interactions: A:V.53, D:T.50 Metal complexes: D:T.50

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 7 residues within 4Å: Chain A: N.71 Chain B: N.71 Chain C: N.71 Chain D: N.71 Ligands: CA.4, CA.6, CA.8 No protein-ligand interaction detected (PLIP) CA.4: 7 residues within 4Å: Chain A: N.71 Chain B: N.71 Chain C: N.71 Chain D: N.71 Ligands: CA.2, CA.6, CA.8 No protein-ligand interaction detected (PLIP) CA.6: 7 residues within 4Å: Chain A: N.71 Chain B: N.71 Chain C: N.71 Chain D: N.71 Ligands: CA.2, CA.4, CA.8 No protein-ligand interaction detected (PLIP) CA.8: 7 residues within 4Å: Chain A: N.71 Chain B: N.71 Chain C: N.71 Chain D: N.71 Ligands: CA.2, CA.4, CA.6 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarbouriech, N. et al., Tetrameric coiled coil domain of Sendai virus phosphoprotein. Nat.Struct.Biol. (2000)

Release Date

2000-09-20

Peptides

NUCLEOCAPSID PHOSPHOPROTEIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

NUCLEOCAPSID PHOSPHOPROTEIN