SMTL ID : 1f0p.1

MYCOBACTERIUM TUBERCULOSIS ANTIGEN 85B WITH TREHALOSE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x GLC- GLC: alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 10 residues within 4Å: Chain A: G.41, L.42, R.43, S.126, A.226, L.229, H.262, S.263, W.264, W.267 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.43, A:R.43, A:S.263 Water bridges: A:N.223 GLC-GLC.2: 9 residues within 4Å: Chain A: L.152, D.154, G.160, L.163, N.231, F.232, S.235, S.236, K.239 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.231, A:S.235 Water bridges: A:F.232, A:R.234, A:S.235

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 8 residues within 4Å: Chain A: S.126, M.127, L.152, L.163, A.167, L.229, V.233, H.262 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.152, A:L.163, A:L.229, A:V.233 Hydrogen bonds: A:S.126 Water bridges: A:L.152 MPD.4: 3 residues within 4Å: Chain A: R.3, D.52, I.53 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.53 Hydrogen bonds: A:R.3, A:I.53 MPD.5: 5 residues within 4Å: Chain A: Y.138, H.139, P.140, Q.141, Q.142 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:H.139, A:Q.142 Water bridges: A:H.139

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.6: 4 residues within 4Å: Chain A: R.206, H.250, N.251, A.252 3 PLIP interactions: 3 interactions with chain A Water bridges: A:A.252, A:A.252 Salt bridges: A:R.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anderson, D.H. et al., An interfacial mechanism and a class of inhibitors inferred from two crystal structures of the Mycobacterium tuberculosis 30 kDa major secretory protein (Antigen 85B), a mycolyl transferase. J.Mol.Biol. (2001)

Release Date

2001-01-24

Peptides

ANTIGEN 85-B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ANTIGEN 85-B

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