SMTL ID : 1f2n.4 (3 other biounits)

RICE YELLOW MOTTLE VIRUS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-trimer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.126, D.129 Chain B: V.182, N.237, T.238 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Metal complexes: A:D.126, A:D.129, B:V.182, B:T.238 CA.2: 5 residues within 4Å: Chain B: D.126, D.129 Chain C: V.182, N.237, T.238 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B Metal complexes: C:V.182, C:T.238, B:D.126, B:D.129 CA.3: 5 residues within 4Å: Chain A: V.182, N.237, T.238 Chain C: D.126, D.129 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A Metal complexes: C:D.126, C:D.129, A:V.182, A:T.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qu, C. et al., 3D domain swapping modulates the stability of members of an icosahedral virus group. Structure Fold.Des. (2000)

Release Date

2000-11-01

Peptides

CAPSID PROTEIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

CAPSID PROTEIN

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