SMTL ID : 1f35.3 (2 other biounits)

CRYSTAL STRUCTURE OF MURINE OLFACTORY MARKER PROTEIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

10 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.115, W.116, E.118 Chain B: D.65 Ligands: ZN.7 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Metal complexes: B:D.65, B:D.65, A:D.115, A:D.115, A:E.118 ZN.2: 2 residues within 4Å: Chain A: D.89 Ligands: CAC.6 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.89, A:D.89, H2O.2 ZN.3: 2 residues within 4Å: Chain A: D.120 Chain B: E.2 5 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:D.120, B:E.2, B:E.2, H2O.1, H2O.3 ZN.4: 4 residues within 4Å: Chain A: D.17, D.19, L.20 Ligands: CAC.6 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.17, A:D.19, A:D.19, H2O.2 ZN.5: 2 residues within 4Å: Chain A: E.2 Chain B: D.120 5 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: B:D.120, A:E.2, A:E.2, H2O.3, H2O.3 ZN.7: 5 residues within 4Å: Chain A: W.116, E.118 Chain B: D.3, D.65 Ligands: ZN.1 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:D.3, B:D.3, B:D.65, A:E.118, H2O.4 ZN.8: 6 residues within 4Å: Chain A: Q.9, D.65 Chain B: D.115, W.116, E.118 Ligands: ZN.9 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Metal complexes: B:D.115, B:E.118, B:E.118, A:D.65, A:D.65 ZN.9: 5 residues within 4Å: Chain A: D.3, D.65 Chain B: W.116, E.118 Ligands: ZN.8 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:D.3, A:D.65, B:E.118, H2O.2, H2O.3 ZN.10: 1 residues within 4Å: Chain B: D.55 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.55 ZN.11: 3 residues within 4Å: Chain B: D.17, D.19, R.53 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.17, B:D.17, B:D.19, H2O.7

1 x CAC: CACODYLATE ION(Non-covalent)

CAC.6: 7 residues within 4Å: Chain A: D.17, D.19, L.20, Q.23, D.89 Ligands: ZN.2, ZN.4 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.53, A:R.53, A:Y.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, P.C. et al., The crystal structure of the olfactory marker protein at 2.3 A resolution. J.Mol.Biol. (2002)

Release Date

2001-08-15

Peptides

OLFACTORY MARKER PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

OLFACTORY MARKER PROTEIN

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